Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LtaP09225 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LtaP09225 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
LtaP09225 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LtaP09225 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LtaP09225 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LtaP09225 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LtaP09225 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LtaP09225 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LtaP09225 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LtaP09225 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LtaP09225 Gm10420-201ENSMUST00000121713 882 ntBASIC18■□□□□ 0.47
LtaP09225 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LtaP09225 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18■□□□□ 0.47
LtaP09225 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LtaP09225 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LtaP09225 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LtaP09225 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LtaP09225 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LtaP09225 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LtaP09225 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.98■□□□□ 0.47
LtaP09225 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.98■□□□□ 0.47
LtaP09225 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LtaP09225 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LtaP09225 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.98■□□□□ 0.47
LtaP09225 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LtaP09225 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LtaP09225 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
LtaP09225 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LtaP09225 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LtaP09225 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.96■□□□□ 0.47
LtaP09225 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LtaP09225 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LtaP09225 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LtaP09225 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LtaP09225 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LtaP09225 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LtaP09225 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LtaP09225 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LtaP09225 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtaP09225 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.94■□□□□ 0.46
LtaP09225 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.94■□□□□ 0.46
LtaP09225 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtaP09225 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtaP09225 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LtaP09225 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LtaP09225 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtaP09225 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.93■□□□□ 0.46
LtaP09225 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LtaP09225 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LtaP09225 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtaP09225 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtaP09225 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LtaP09225 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtaP09225 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtaP09225 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtaP09225 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LtaP09225 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtaP09225 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LtaP09225 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtaP09225 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LtaP09225 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LtaP09225 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.91■□□□□ 0.46
LtaP09225 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.91■□□□□ 0.46
LtaP09225 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LtaP09225 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LtaP09225 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LtaP09225 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LtaP09225 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LtaP09225 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LtaP09225 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LtaP09225 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LtaP09225 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.9■□□□□ 0.46
LtaP09225 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LtaP09225 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LtaP09225 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
LtaP09225 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LtaP09225 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LtaP09225 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LtaP09225 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LtaP09225 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LtaP09225 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LtaP09225 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LtaP09225 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LtaP09225 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LtaP09225 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LtaP09225 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
LtaP09225 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.87■□□□□ 0.45
LtaP09225 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LtaP09225 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LtaP09225 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LtaP09225 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LtaP09225 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LtaP09225 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LtaP09225 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LtaP09225 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LtaP09225 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
LtaP09225 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LtaP09225 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LtaP09225 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms