Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.14■□□□□ 0.97
Col4a2P08122 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a2P08122 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Col4a2P08122 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a2P08122 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a2P08122 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a2P08122 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a2P08122 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col4a2P08122 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a2P08122 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Col4a2P08122 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.12■□□□□ 0.97
Col4a2P08122 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Col4a2P08122 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col4a2P08122 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Col4a2P08122 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a2P08122 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a2P08122 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.11■□□□□ 0.97
Col4a2P08122 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.11■□□□□ 0.97
Col4a2P08122 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a2P08122 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a2P08122 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col4a2P08122 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a2P08122 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a2P08122 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Col4a2P08122 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Col4a2P08122 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.1■□□□□ 0.97
Col4a2P08122 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col4a2P08122 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.09■□□□□ 0.97
Col4a2P08122 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.09■□□□□ 0.97
Col4a2P08122 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a2P08122 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a2P08122 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.09■□□□□ 0.97
Col4a2P08122 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a2P08122 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a2P08122 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a2P08122 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a2P08122 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a2P08122 Gm9959-201ENSMUST00000068277 390 ntBASIC21.08■□□□□ 0.97
Col4a2P08122 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a2P08122 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a2P08122 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col4a2P08122 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a2P08122 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a2P08122 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a2P08122 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.06■□□□□ 0.96
Col4a2P08122 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a2P08122 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a2P08122 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a2P08122 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a2P08122 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.05■□□□□ 0.96
Col4a2P08122 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a2P08122 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a2P08122 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.04■□□□□ 0.96
Col4a2P08122 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a2P08122 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.04■□□□□ 0.96
Col4a2P08122 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a2P08122 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.04■□□□□ 0.96
Col4a2P08122 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a2P08122 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a2P08122 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a2P08122 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a2P08122 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a2P08122 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.02■□□□□ 0.96
Col4a2P08122 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a2P08122 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Col4a2P08122 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a2P08122 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a2P08122 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a2P08122 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Col4a2P08122 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a2P08122 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a2P08122 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a2P08122 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col4a2P08122 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Col4a2P08122 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a2P08122 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a2P08122 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a2P08122 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a2P08122 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21■□□□□ 0.95
Col4a2P08122 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Col4a2P08122 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a2P08122 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a2P08122 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Col4a2P08122 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a2P08122 Gm10232-201ENSMUST00000089221 720 ntBASIC20.99■□□□□ 0.95
Col4a2P08122 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a2P08122 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a2P08122 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a2P08122 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Col4a2P08122 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a2P08122 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a2P08122 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a2P08122 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.97■□□□□ 0.95
Col4a2P08122 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a2P08122 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a2P08122 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.96■□□□□ 0.95
Col4a2P08122 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a2P08122 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a2P08122 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a2P08122 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms