Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ttc3O88196 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ttc3O88196 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ttc3O88196 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.65■■□□□ 1.38
Ttc3O88196 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ttc3O88196 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Ttc3O88196 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ttc3O88196 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Ttc3O88196 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Ttc3O88196 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ttc3O88196 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ttc3O88196 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.63■■□□□ 1.37
Ttc3O88196 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.63■■□□□ 1.37
Ttc3O88196 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ttc3O88196 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ttc3O88196 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ttc3O88196 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ttc3O88196 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ttc3O88196 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
Ttc3O88196 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ttc3O88196 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ttc3O88196 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ttc3O88196 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ttc3O88196 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Ttc3O88196 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.61■■□□□ 1.37
Ttc3O88196 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ttc3O88196 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ttc3O88196 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Ttc3O88196 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ttc3O88196 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.6■■□□□ 1.37
Ttc3O88196 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ttc3O88196 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ttc3O88196 Gm22567-201ENSMUST00000175542 342 ntBASIC23.58■■□□□ 1.37
Ttc3O88196 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ttc3O88196 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Ttc3O88196 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ttc3O88196 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.58■■□□□ 1.36
Ttc3O88196 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ttc3O88196 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Ttc3O88196 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Ttc3O88196 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Ttc3O88196 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ttc3O88196 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ttc3O88196 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ttc3O88196 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ttc3O88196 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ttc3O88196 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ttc3O88196 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ttc3O88196 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.56■■□□□ 1.36
Ttc3O88196 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ttc3O88196 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ttc3O88196 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ttc3O88196 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ttc3O88196 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ttc3O88196 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.54■■□□□ 1.36
Ttc3O88196 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ttc3O88196 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ttc3O88196 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ttc3O88196 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.54■■□□□ 1.36
Ttc3O88196 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ttc3O88196 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ttc3O88196 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ttc3O88196 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ttc3O88196 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ttc3O88196 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ttc3O88196 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ttc3O88196 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ttc3O88196 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Ttc3O88196 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ttc3O88196 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.51■■□□□ 1.35
Ttc3O88196 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.51■■□□□ 1.35
Ttc3O88196 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Ttc3O88196 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ttc3O88196 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Ttc3O88196 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ttc3O88196 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ttc3O88196 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Ttc3O88196 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ttc3O88196 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ttc3O88196 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.5■■□□□ 1.35
Ttc3O88196 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ttc3O88196 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ttc3O88196 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Ttc3O88196 Gm15820-201ENSMUST00000201566 728 ntBASIC23.48■■□□□ 1.35
Ttc3O88196 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.48■■□□□ 1.35
Ttc3O88196 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.48■■□□□ 1.35
Ttc3O88196 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ttc3O88196 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Ttc3O88196 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ttc3O88196 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ttc3O88196 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.48■■□□□ 1.35
Ttc3O88196 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ttc3O88196 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ttc3O88196 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ttc3O88196 Gm14117-201ENSMUST00000122417 843 ntBASIC23.46■■□□□ 1.35
Ttc3O88196 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ttc3O88196 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ttc3O88196 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ttc3O88196 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ttc3O88196 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms