Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Atf6bO35451 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf6bO35451 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Atf6bO35451 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.01■□□□□ 0.63
Atf6bO35451 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf6bO35451 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Atf6bO35451 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Atf6bO35451 Cap2-205ENSMUST00000225824 1634 ntBASIC19■□□□□ 0.63
Atf6bO35451 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Atf6bO35451 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf6bO35451 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19■□□□□ 0.63
Atf6bO35451 Gm12366-201ENSMUST00000121722 873 ntBASIC19■□□□□ 0.63
Atf6bO35451 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19■□□□□ 0.63
Atf6bO35451 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19■□□□□ 0.63
Atf6bO35451 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf6bO35451 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19■□□□□ 0.63
Atf6bO35451 Gm5786-201ENSMUST00000085368 882 ntBASIC19■□□□□ 0.63
Atf6bO35451 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Atf6bO35451 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19■□□□□ 0.63
Atf6bO35451 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Atf6bO35451 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf6bO35451 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Atf6bO35451 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf6bO35451 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Atf6bO35451 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf6bO35451 Gm44428-201ENSMUST00000204474 874 ntBASIC18.99■□□□□ 0.63
Atf6bO35451 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Atf6bO35451 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Atf6bO35451 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Atf6bO35451 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf6bO35451 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Atf6bO35451 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf6bO35451 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Atf6bO35451 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.98■□□□□ 0.63
Atf6bO35451 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.98■□□□□ 0.63
Atf6bO35451 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.98■□□□□ 0.63
Atf6bO35451 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.97■□□□□ 0.63
Atf6bO35451 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf6bO35451 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf6bO35451 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.97■□□□□ 0.63
Atf6bO35451 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf6bO35451 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf6bO35451 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Atf6bO35451 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Atf6bO35451 Gm14523-201ENSMUST00000117260 558 ntBASIC18.96■□□□□ 0.63
Atf6bO35451 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf6bO35451 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf6bO35451 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.96■□□□□ 0.63
Atf6bO35451 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf6bO35451 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf6bO35451 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf6bO35451 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Atf6bO35451 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Atf6bO35451 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Atf6bO35451 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Atf6bO35451 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Atf6bO35451 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atf6bO35451 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atf6bO35451 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.94■□□□□ 0.62
Atf6bO35451 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Atf6bO35451 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atf6bO35451 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.94■□□□□ 0.62
Atf6bO35451 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6bO35451 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6bO35451 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Atf6bO35451 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6bO35451 Gm7332-201ENSMUST00000118351 454 ntBASIC18.93■□□□□ 0.62
Atf6bO35451 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6bO35451 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6bO35451 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.92■□□□□ 0.62
Atf6bO35451 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6bO35451 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6bO35451 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6bO35451 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Atf6bO35451 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6bO35451 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6bO35451 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.92■□□□□ 0.62
Atf6bO35451 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6bO35451 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6bO35451 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6bO35451 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.91■□□□□ 0.62
Atf6bO35451 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.91■□□□□ 0.62
Atf6bO35451 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6bO35451 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atf6bO35451 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.9■□□□□ 0.62
Atf6bO35451 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.9■□□□□ 0.62
Atf6bO35451 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atf6bO35451 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atf6bO35451 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Atf6bO35451 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Atf6bO35451 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atf6bO35451 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Atf6bO35451 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6bO35451 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.89■□□□□ 0.61
Atf6bO35451 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Atf6bO35451 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6bO35451 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6bO35451 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6bO35451 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6bO35451 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms