Protein–RNA interactions for Protein: O35253

Smad7, Mothers against decapentaplegic homolog 7, mousemouse

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad7O35253 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smad7O35253 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smad7O35253 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smad7O35253 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.55■□□□□ 0.56
Smad7O35253 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smad7O35253 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smad7O35253 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.54■□□□□ 0.56
Smad7O35253 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Smad7O35253 Serp2-204ENSMUST00000228055 705 ntBASIC18.54■□□□□ 0.56
Smad7O35253 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.54■□□□□ 0.56
Smad7O35253 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Smad7O35253 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad7O35253 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad7O35253 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad7O35253 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smad7O35253 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad7O35253 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smad7O35253 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad7O35253 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad7O35253 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.52■□□□□ 0.56
Smad7O35253 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad7O35253 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Smad7O35253 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smad7O35253 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad7O35253 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smad7O35253 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.51■□□□□ 0.55
Smad7O35253 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad7O35253 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.51■□□□□ 0.55
Smad7O35253 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smad7O35253 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Smad7O35253 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad7O35253 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smad7O35253 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.5■□□□□ 0.55
Smad7O35253 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smad7O35253 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad7O35253 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smad7O35253 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad7O35253 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad7O35253 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad7O35253 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smad7O35253 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smad7O35253 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Smad7O35253 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smad7O35253 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.48■□□□□ 0.55
Smad7O35253 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smad7O35253 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smad7O35253 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smad7O35253 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.46■□□□□ 0.55
Smad7O35253 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smad7O35253 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smad7O35253 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smad7O35253 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smad7O35253 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.45■□□□□ 0.54
Smad7O35253 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smad7O35253 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad7O35253 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad7O35253 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smad7O35253 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad7O35253 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.44■□□□□ 0.54
Smad7O35253 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smad7O35253 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smad7O35253 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.43■□□□□ 0.54
Smad7O35253 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smad7O35253 Gm7417-201ENSMUST00000192950 473 ntBASIC18.43■□□□□ 0.54
Smad7O35253 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Smad7O35253 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.42■□□□□ 0.54
Smad7O35253 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smad7O35253 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smad7O35253 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.42■□□□□ 0.54
Smad7O35253 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smad7O35253 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Smad7O35253 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad7O35253 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smad7O35253 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Smad7O35253 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad7O35253 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.41■□□□□ 0.54
Smad7O35253 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad7O35253 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad7O35253 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad7O35253 Gm13241-201ENSMUST00000094493 780 ntBASIC18.41■□□□□ 0.54
Smad7O35253 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad7O35253 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.41■□□□□ 0.54
Smad7O35253 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smad7O35253 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Smad7O35253 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smad7O35253 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smad7O35253 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.4■□□□□ 0.54
Smad7O35253 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smad7O35253 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.4■□□□□ 0.54
Smad7O35253 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.4■□□□□ 0.54
Smad7O35253 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smad7O35253 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smad7O35253 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.39■□□□□ 0.53
Smad7O35253 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smad7O35253 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad7O35253 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad7O35253 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad7O35253 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smad7O35253 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smad7O35253 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms