Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hps1O08983 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hps1O08983 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hps1O08983 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hps1O08983 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hps1O08983 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hps1O08983 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.22■□□□□ 0.83
Hps1O08983 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hps1O08983 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hps1O08983 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hps1O08983 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hps1O08983 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.22■□□□□ 0.83
Hps1O08983 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.21■□□□□ 0.83
Hps1O08983 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hps1O08983 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hps1O08983 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hps1O08983 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hps1O08983 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hps1O08983 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hps1O08983 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.2■□□□□ 0.82
Hps1O08983 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hps1O08983 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hps1O08983 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hps1O08983 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hps1O08983 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hps1O08983 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hps1O08983 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hps1O08983 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hps1O08983 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hps1O08983 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hps1O08983 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hps1O08983 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hps1O08983 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Hps1O08983 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hps1O08983 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Hps1O08983 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hps1O08983 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hps1O08983 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hps1O08983 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.17■□□□□ 0.82
Hps1O08983 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.17■□□□□ 0.82
Hps1O08983 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Hps1O08983 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hps1O08983 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Hps1O08983 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hps1O08983 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hps1O08983 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hps1O08983 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hps1O08983 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hps1O08983 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hps1O08983 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hps1O08983 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.15■□□□□ 0.82
Hps1O08983 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hps1O08983 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hps1O08983 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hps1O08983 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hps1O08983 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.15■□□□□ 0.82
Hps1O08983 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Hps1O08983 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hps1O08983 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hps1O08983 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.14■□□□□ 0.81
Hps1O08983 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hps1O08983 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hps1O08983 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hps1O08983 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hps1O08983 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hps1O08983 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.12■□□□□ 0.81
Hps1O08983 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hps1O08983 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hps1O08983 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hps1O08983 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hps1O08983 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.12■□□□□ 0.81
Hps1O08983 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hps1O08983 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hps1O08983 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.11■□□□□ 0.81
Hps1O08983 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hps1O08983 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hps1O08983 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hps1O08983 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hps1O08983 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hps1O08983 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hps1O08983 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hps1O08983 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hps1O08983 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hps1O08983 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hps1O08983 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hps1O08983 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hps1O08983 Gm11687-201ENSMUST00000118911 886 ntBASIC20.09■□□□□ 0.81
Hps1O08983 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hps1O08983 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hps1O08983 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hps1O08983 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hps1O08983 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hps1O08983 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hps1O08983 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Hps1O08983 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.08■□□□□ 0.8
Hps1O08983 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hps1O08983 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Hps1O08983 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps1O08983 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hps1O08983 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 229.6 ms