Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pkd1O08852 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pkd1O08852 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.54□□□□□ -0.08
Pkd1O08852 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pkd1O08852 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.54□□□□□ -0.08
Pkd1O08852 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pkd1O08852 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pkd1O08852 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.53□□□□□ -0.08
Pkd1O08852 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pkd1O08852 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pkd1O08852 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.53□□□□□ -0.08
Pkd1O08852 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.53□□□□□ -0.08
Pkd1O08852 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pkd1O08852 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pkd1O08852 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.52□□□□□ -0.08
Pkd1O08852 Amer2-203ENSMUST00000225247 2662 ntBASIC14.52□□□□□ -0.09
Pkd1O08852 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pkd1O08852 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pkd1O08852 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pkd1O08852 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pkd1O08852 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Pkd1O08852 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pkd1O08852 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pkd1O08852 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.51□□□□□ -0.09
Pkd1O08852 Gm22238-201ENSMUST00000175222 88 ntBASIC14.5□□□□□ -0.09
Pkd1O08852 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.5□□□□□ -0.09
Pkd1O08852 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pkd1O08852 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Pkd1O08852 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pkd1O08852 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pkd1O08852 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.49□□□□□ -0.09
Pkd1O08852 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd1O08852 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd1O08852 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pkd1O08852 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd1O08852 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.49□□□□□ -0.09
Pkd1O08852 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pkd1O08852 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.49□□□□□ -0.09
Pkd1O08852 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.48□□□□□ -0.09
Pkd1O08852 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pkd1O08852 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd1O08852 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd1O08852 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.48□□□□□ -0.09
Pkd1O08852 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd1O08852 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkd1O08852 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pkd1O08852 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pkd1O08852 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd1O08852 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pkd1O08852 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC14.47□□□□□ -0.09
Pkd1O08852 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd1O08852 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd1O08852 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pkd1O08852 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pkd1O08852 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.46□□□□□ -0.09
Pkd1O08852 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.46□□□□□ -0.09
Pkd1O08852 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.46□□□□□ -0.09
Pkd1O08852 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pkd1O08852 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pkd1O08852 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pkd1O08852 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pkd1O08852 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pkd1O08852 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.46□□□□□ -0.09
Pkd1O08852 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pkd1O08852 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Pkd1O08852 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pkd1O08852 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pkd1O08852 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC14.45□□□□□ -0.1
Pkd1O08852 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pkd1O08852 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pkd1O08852 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pkd1O08852 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pkd1O08852 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pkd1O08852 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Pkd1O08852 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pkd1O08852 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pkd1O08852 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pkd1O08852 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pkd1O08852 Gm12922-201ENSMUST00000120626 809 ntBASIC14.44□□□□□ -0.1
Pkd1O08852 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pkd1O08852 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pkd1O08852 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pkd1O08852 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pkd1O08852 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC14.43□□□□□ -0.1
Pkd1O08852 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pkd1O08852 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pkd1O08852 Gm9847-201ENSMUST00000052528 599 ntBASIC14.42□□□□□ -0.1
Pkd1O08852 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pkd1O08852 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkd1O08852 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkd1O08852 Golgb1-201ENSMUST00000023534 498 ntBASIC14.41□□□□□ -0.1
Pkd1O08852 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkd1O08852 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkd1O08852 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkd1O08852 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.41□□□□□ -0.1
Pkd1O08852 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkd1O08852 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkd1O08852 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.4□□□□□ -0.1
Pkd1O08852 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pkd1O08852 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms