Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3543D3Z235 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.87■□□□□ 0.77
Gm3543D3Z235 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3543D3Z235 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3543D3Z235 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3543D3Z235 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm3543D3Z235 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm3543D3Z235 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3543D3Z235 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm3543D3Z235 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3543D3Z235 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3543D3Z235 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.85■□□□□ 0.77
Gm3543D3Z235 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3543D3Z235 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.85■□□□□ 0.77
Gm3543D3Z235 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm3543D3Z235 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.85■□□□□ 0.77
Gm3543D3Z235 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3543D3Z235 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3543D3Z235 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Gm3543D3Z235 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3543D3Z235 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3543D3Z235 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3543D3Z235 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm3543D3Z235 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Gm3543D3Z235 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gm3543D3Z235 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.83■□□□□ 0.77
Gm3543D3Z235 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm3543D3Z235 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm3543D3Z235 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gm3543D3Z235 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm3543D3Z235 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm3543D3Z235 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm3543D3Z235 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Gm3543D3Z235 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Gm3543D3Z235 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Gm3543D3Z235 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm3543D3Z235 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm3543D3Z235 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Gm3543D3Z235 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm3543D3Z235 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.81■□□□□ 0.76
Gm3543D3Z235 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm3543D3Z235 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.81■□□□□ 0.76
Gm3543D3Z235 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Gm3543D3Z235 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.81■□□□□ 0.76
Gm3543D3Z235 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3543D3Z235 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Gm3543D3Z235 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3543D3Z235 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3543D3Z235 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3543D3Z235 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3543D3Z235 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.8■□□□□ 0.76
Gm3543D3Z235 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.8■□□□□ 0.76
Gm3543D3Z235 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Gm3543D3Z235 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3543D3Z235 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3543D3Z235 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm3543D3Z235 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Gm3543D3Z235 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Gm3543D3Z235 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Gm3543D3Z235 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm3543D3Z235 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm3543D3Z235 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.79■□□□□ 0.76
Gm3543D3Z235 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.79■□□□□ 0.76
Gm3543D3Z235 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm3543D3Z235 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm3543D3Z235 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm3543D3Z235 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm3543D3Z235 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm3543D3Z235 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm3543D3Z235 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Gm3543D3Z235 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm3543D3Z235 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm3543D3Z235 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm3543D3Z235 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm3543D3Z235 Gm10420-201ENSMUST00000121713 882 ntBASIC19.76■□□□□ 0.75
Gm3543D3Z235 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.76■□□□□ 0.75
Gm3543D3Z235 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.76■□□□□ 0.75
Gm3543D3Z235 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3543D3Z235 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3543D3Z235 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3543D3Z235 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm3543D3Z235 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Gm3543D3Z235 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3543D3Z235 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gm3543D3Z235 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3543D3Z235 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3543D3Z235 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3543D3Z235 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Gm3543D3Z235 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3543D3Z235 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms