Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.56■■□□□ 1.36
Sh2d4bA6X942 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh2d4bA6X942 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.56■■□□□ 1.36
Sh2d4bA6X942 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh2d4bA6X942 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.55■■□□□ 1.36
Sh2d4bA6X942 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sh2d4bA6X942 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Sh2d4bA6X942 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sh2d4bA6X942 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sh2d4bA6X942 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sh2d4bA6X942 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sh2d4bA6X942 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Sh2d4bA6X942 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sh2d4bA6X942 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sh2d4bA6X942 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sh2d4bA6X942 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh2d4bA6X942 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Sh2d4bA6X942 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh2d4bA6X942 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.51■■□□□ 1.35
Sh2d4bA6X942 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh2d4bA6X942 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh2d4bA6X942 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh2d4bA6X942 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh2d4bA6X942 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh2d4bA6X942 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.5■■□□□ 1.35
Sh2d4bA6X942 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sh2d4bA6X942 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sh2d4bA6X942 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sh2d4bA6X942 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sh2d4bA6X942 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Sh2d4bA6X942 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.49■■□□□ 1.35
Sh2d4bA6X942 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sh2d4bA6X942 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sh2d4bA6X942 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sh2d4bA6X942 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh2d4bA6X942 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh2d4bA6X942 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.48■■□□□ 1.35
Sh2d4bA6X942 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh2d4bA6X942 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh2d4bA6X942 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh2d4bA6X942 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh2d4bA6X942 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh2d4bA6X942 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.47■■□□□ 1.35
Sh2d4bA6X942 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Sh2d4bA6X942 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.46■■□□□ 1.35
Sh2d4bA6X942 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sh2d4bA6X942 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Sh2d4bA6X942 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sh2d4bA6X942 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
Sh2d4bA6X942 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.45■■□□□ 1.34
Sh2d4bA6X942 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Sh2d4bA6X942 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Sh2d4bA6X942 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sh2d4bA6X942 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.45■■□□□ 1.34
Sh2d4bA6X942 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.45■■□□□ 1.34
Sh2d4bA6X942 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Sh2d4bA6X942 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh2d4bA6X942 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Sh2d4bA6X942 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Sh2d4bA6X942 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Sh2d4bA6X942 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Sh2d4bA6X942 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sh2d4bA6X942 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.43■■□□□ 1.34
Sh2d4bA6X942 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sh2d4bA6X942 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.43■■□□□ 1.34
Sh2d4bA6X942 Gm9959-201ENSMUST00000068277 390 ntBASIC23.43■■□□□ 1.34
Sh2d4bA6X942 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sh2d4bA6X942 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Sh2d4bA6X942 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Sh2d4bA6X942 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
Sh2d4bA6X942 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sh2d4bA6X942 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sh2d4bA6X942 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Sh2d4bA6X942 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sh2d4bA6X942 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.42■■□□□ 1.34
Sh2d4bA6X942 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Sh2d4bA6X942 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Sh2d4bA6X942 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sh2d4bA6X942 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.41■■□□□ 1.34
Sh2d4bA6X942 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Sh2d4bA6X942 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Sh2d4bA6X942 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh2d4bA6X942 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh2d4bA6X942 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Sh2d4bA6X942 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Sh2d4bA6X942 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh2d4bA6X942 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh2d4bA6X942 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh2d4bA6X942 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Sh2d4bA6X942 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sh2d4bA6X942 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.38■■□□□ 1.33
Sh2d4bA6X942 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh2d4bA6X942 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Sh2d4bA6X942 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh2d4bA6X942 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sh2d4bA6X942 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh2d4bA6X942 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh2d4bA6X942 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh2d4bA6X942 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
Sh2d4bA6X942 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms