Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav8n-2A0A075B633 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.48■□□□□ 0.87
Trav8n-2A0A075B633 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.48■□□□□ 0.87
Trav8n-2A0A075B633 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav8n-2A0A075B633 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav8n-2A0A075B633 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Trav8n-2A0A075B633 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav8n-2A0A075B633 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trav8n-2A0A075B633 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trav8n-2A0A075B633 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav8n-2A0A075B633 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav8n-2A0A075B633 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav8n-2A0A075B633 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav8n-2A0A075B633 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav8n-2A0A075B633 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav8n-2A0A075B633 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav8n-2A0A075B633 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav8n-2A0A075B633 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trav8n-2A0A075B633 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav8n-2A0A075B633 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.45■□□□□ 0.86
Trav8n-2A0A075B633 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Trav8n-2A0A075B633 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8n-2A0A075B633 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8n-2A0A075B633 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav8n-2A0A075B633 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trav8n-2A0A075B633 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8n-2A0A075B633 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav8n-2A0A075B633 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.43■□□□□ 0.86
Trav8n-2A0A075B633 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8n-2A0A075B633 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8n-2A0A075B633 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8n-2A0A075B633 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav8n-2A0A075B633 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8n-2A0A075B633 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.42■□□□□ 0.86
Trav8n-2A0A075B633 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8n-2A0A075B633 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trav8n-2A0A075B633 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Trav8n-2A0A075B633 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8n-2A0A075B633 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8n-2A0A075B633 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8n-2A0A075B633 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8n-2A0A075B633 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav8n-2A0A075B633 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav8n-2A0A075B633 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav8n-2A0A075B633 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.41■□□□□ 0.86
Trav8n-2A0A075B633 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav8n-2A0A075B633 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav8n-2A0A075B633 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav8n-2A0A075B633 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav8n-2A0A075B633 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav8n-2A0A075B633 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.39■□□□□ 0.85
Trav8n-2A0A075B633 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.39■□□□□ 0.85
Trav8n-2A0A075B633 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav8n-2A0A075B633 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav8n-2A0A075B633 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav8n-2A0A075B633 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.38■□□□□ 0.85
Trav8n-2A0A075B633 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trav8n-2A0A075B633 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav8n-2A0A075B633 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav8n-2A0A075B633 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trav8n-2A0A075B633 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.37■□□□□ 0.85
Trav8n-2A0A075B633 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav8n-2A0A075B633 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav8n-2A0A075B633 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav8n-2A0A075B633 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav8n-2A0A075B633 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.36■□□□□ 0.85
Trav8n-2A0A075B633 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Trav8n-2A0A075B633 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.36■□□□□ 0.85
Trav8n-2A0A075B633 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
Trav8n-2A0A075B633 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav8n-2A0A075B633 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav8n-2A0A075B633 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav8n-2A0A075B633 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav8n-2A0A075B633 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav8n-2A0A075B633 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8n-2A0A075B633 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav8n-2A0A075B633 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav8n-2A0A075B633 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.33■□□□□ 0.85
Trav8n-2A0A075B633 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav8n-2A0A075B633 Gm7417-201ENSMUST00000192950 473 ntBASIC20.33■□□□□ 0.85
Trav8n-2A0A075B633 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trav8n-2A0A075B633 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav8n-2A0A075B633 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.32■□□□□ 0.84
Trav8n-2A0A075B633 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav8n-2A0A075B633 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trav8n-2A0A075B633 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav8n-2A0A075B633 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.31■□□□□ 0.84
Trav8n-2A0A075B633 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.31■□□□□ 0.84
Trav8n-2A0A075B633 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav8n-2A0A075B633 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms