Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.53□□□□□ -0.08
Hoxb3P09026 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Hoxb3P09026 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hoxb3P09026 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.53□□□□□ -0.08
Hoxb3P09026 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Hoxb3P09026 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.53□□□□□ -0.08
Hoxb3P09026 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.53□□□□□ -0.08
Hoxb3P09026 Gm14363-201ENSMUST00000122304 409 ntBASIC14.53□□□□□ -0.08
Hoxb3P09026 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.53□□□□□ -0.08
Hoxb3P09026 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.53□□□□□ -0.08
Hoxb3P09026 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.53□□□□□ -0.08
Hoxb3P09026 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Hoxb3P09026 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hoxb3P09026 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.53□□□□□ -0.08
Hoxb3P09026 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Hoxb3P09026 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxb3P09026 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxb3P09026 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxb3P09026 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxb3P09026 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxb3P09026 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxb3P09026 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxb3P09026 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxb3P09026 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hoxb3P09026 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Hoxb3P09026 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
Hoxb3P09026 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.52□□□□□ -0.09
Hoxb3P09026 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.52□□□□□ -0.09
Hoxb3P09026 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.52□□□□□ -0.09
Hoxb3P09026 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Mir7032-201ENSMUST00000185154 79 ntBASIC14.52□□□□□ -0.09
Hoxb3P09026 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.52□□□□□ -0.09
Hoxb3P09026 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.52□□□□□ -0.09
Hoxb3P09026 Gm18049-201ENSMUST00000208909 581 ntBASIC14.52□□□□□ -0.09
Hoxb3P09026 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.52□□□□□ -0.09
Hoxb3P09026 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.52□□□□□ -0.09
Hoxb3P09026 Gm24526-201ENSMUST00000082921 158 ntBASIC14.52□□□□□ -0.09
Hoxb3P09026 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Hoxb3P09026 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Hoxb3P09026 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Hoxb3P09026 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.52□□□□□ -0.09
Hoxb3P09026 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hoxb3P09026 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hoxb3P09026 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.52□□□□□ -0.09
Hoxb3P09026 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.52□□□□□ -0.09
Hoxb3P09026 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Hoxb3P09026 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hoxb3P09026 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Hoxb3P09026 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Hoxb3P09026 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
Hoxb3P09026 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Hoxb3P09026 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.51□□□□□ -0.09
Hoxb3P09026 Gm27341-201ENSMUST00000183570 106 ntBASIC14.51□□□□□ -0.09
Hoxb3P09026 Gm27501-201ENSMUST00000183599 107 ntBASIC14.51□□□□□ -0.09
Hoxb3P09026 Gm18766-201ENSMUST00000189811 808 ntBASIC14.51□□□□□ -0.09
Hoxb3P09026 Gm37424-201ENSMUST00000191727 561 ntBASIC14.51□□□□□ -0.09
Hoxb3P09026 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC14.51□□□□□ -0.09
Hoxb3P09026 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hoxb3P09026 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC14.51□□□□□ -0.09
Hoxb3P09026 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms