Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.43■■□□□ 1.02
Cldn9Q9Z0S7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.43■■□□□ 1.02
Cldn9Q9Z0S7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cldn9Q9Z0S7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cldn9Q9Z0S7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cldn9Q9Z0S7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cldn9Q9Z0S7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Cldn9Q9Z0S7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cldn9Q9Z0S7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Cldn9Q9Z0S7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cldn9Q9Z0S7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cldn9Q9Z0S7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cldn9Q9Z0S7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cldn9Q9Z0S7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cldn9Q9Z0S7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cldn9Q9Z0S7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Cldn9Q9Z0S7 Gm6311-201ENSMUST00000073790 878 ntBASIC21.4■■□□□ 1.02
Cldn9Q9Z0S7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cldn9Q9Z0S7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cldn9Q9Z0S7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cldn9Q9Z0S7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Cldn9Q9Z0S7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cldn9Q9Z0S7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cldn9Q9Z0S7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.39■■□□□ 1.01
Cldn9Q9Z0S7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cldn9Q9Z0S7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cldn9Q9Z0S7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cldn9Q9Z0S7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cldn9Q9Z0S7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cldn9Q9Z0S7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.37■■□□□ 1.01
Cldn9Q9Z0S7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cldn9Q9Z0S7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.37■■□□□ 1.01
Cldn9Q9Z0S7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cldn9Q9Z0S7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cldn9Q9Z0S7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cldn9Q9Z0S7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cldn9Q9Z0S7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Cldn9Q9Z0S7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cldn9Q9Z0S7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cldn9Q9Z0S7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.35■■□□□ 1.01
Cldn9Q9Z0S7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cldn9Q9Z0S7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cldn9Q9Z0S7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cldn9Q9Z0S7 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.34■■□□□ 1.01
Cldn9Q9Z0S7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cldn9Q9Z0S7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cldn9Q9Z0S7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Cldn9Q9Z0S7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cldn9Q9Z0S7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cldn9Q9Z0S7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cldn9Q9Z0S7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cldn9Q9Z0S7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cldn9Q9Z0S7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cldn9Q9Z0S7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cldn9Q9Z0S7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cldn9Q9Z0S7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Cldn9Q9Z0S7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cldn9Q9Z0S7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.31■■□□□ 1
Cldn9Q9Z0S7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.31■■□□□ 1
Cldn9Q9Z0S7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn9Q9Z0S7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.3■■□□□ 1
Cldn9Q9Z0S7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cldn9Q9Z0S7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cldn9Q9Z0S7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cldn9Q9Z0S7 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.3■■□□□ 1
Cldn9Q9Z0S7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.29■■□□□ 1
Cldn9Q9Z0S7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cldn9Q9Z0S7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cldn9Q9Z0S7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cldn9Q9Z0S7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.28■■□□□ 1
Cldn9Q9Z0S7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn9Q9Z0S7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn9Q9Z0S7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
Cldn9Q9Z0S7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn9Q9Z0S7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn9Q9Z0S7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cldn9Q9Z0S7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.28■■□□□ 1
Cldn9Q9Z0S7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.27■■□□□ 1
Cldn9Q9Z0S7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cldn9Q9Z0S7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cldn9Q9Z0S7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cldn9Q9Z0S7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.26■□□□□ 0.99
Cldn9Q9Z0S7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.26■□□□□ 0.99
Cldn9Q9Z0S7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cldn9Q9Z0S7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cldn9Q9Z0S7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cldn9Q9Z0S7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cldn9Q9Z0S7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms