Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RpgrQ9R0X5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RpgrQ9R0X5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RpgrQ9R0X5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.39■■□□□ 1.17
RpgrQ9R0X5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RpgrQ9R0X5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RpgrQ9R0X5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RpgrQ9R0X5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RpgrQ9R0X5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.37■■□□□ 1.17
RpgrQ9R0X5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RpgrQ9R0X5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.37■■□□□ 1.17
RpgrQ9R0X5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RpgrQ9R0X5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RpgrQ9R0X5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RpgrQ9R0X5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RpgrQ9R0X5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RpgrQ9R0X5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RpgrQ9R0X5 Gm6311-201ENSMUST00000073790 878 ntBASIC22.35■■□□□ 1.17
RpgrQ9R0X5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RpgrQ9R0X5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RpgrQ9R0X5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RpgrQ9R0X5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RpgrQ9R0X5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
RpgrQ9R0X5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RpgrQ9R0X5 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.33■■□□□ 1.17
RpgrQ9R0X5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RpgrQ9R0X5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.33■■□□□ 1.17
RpgrQ9R0X5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RpgrQ9R0X5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.33■■□□□ 1.17
RpgrQ9R0X5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
RpgrQ9R0X5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RpgrQ9R0X5 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RpgrQ9R0X5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.16
RpgrQ9R0X5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
RpgrQ9R0X5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RpgrQ9R0X5 Gm9812-201ENSMUST00000061934 968 ntBASIC22.32■■□□□ 1.16
RpgrQ9R0X5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RpgrQ9R0X5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RpgrQ9R0X5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RpgrQ9R0X5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RpgrQ9R0X5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RpgrQ9R0X5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RpgrQ9R0X5 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.3■■□□□ 1.16
RpgrQ9R0X5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RpgrQ9R0X5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RpgrQ9R0X5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RpgrQ9R0X5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.29■■□□□ 1.16
RpgrQ9R0X5 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.29■■□□□ 1.16
RpgrQ9R0X5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RpgrQ9R0X5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RpgrQ9R0X5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RpgrQ9R0X5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RpgrQ9R0X5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RpgrQ9R0X5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RpgrQ9R0X5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RpgrQ9R0X5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RpgrQ9R0X5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RpgrQ9R0X5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RpgrQ9R0X5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RpgrQ9R0X5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RpgrQ9R0X5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RpgrQ9R0X5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RpgrQ9R0X5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Gm45364-201ENSMUST00000210883 159 ntBASIC22.25■■□□□ 1.15
RpgrQ9R0X5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RpgrQ9R0X5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RpgrQ9R0X5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RpgrQ9R0X5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RpgrQ9R0X5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RpgrQ9R0X5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RpgrQ9R0X5 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.23■■□□□ 1.15
RpgrQ9R0X5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RpgrQ9R0X5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RpgrQ9R0X5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RpgrQ9R0X5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.23■■□□□ 1.15
RpgrQ9R0X5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RpgrQ9R0X5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RpgrQ9R0X5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RpgrQ9R0X5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RpgrQ9R0X5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RpgrQ9R0X5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RpgrQ9R0X5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RpgrQ9R0X5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.22■■□□□ 1.15
RpgrQ9R0X5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RpgrQ9R0X5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RpgrQ9R0X5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RpgrQ9R0X5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.15
RpgrQ9R0X5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RpgrQ9R0X5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.2■■□□□ 1.14
RpgrQ9R0X5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms