Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.22■□□□□ 0.51
Crlf1Q9JM58 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crlf1Q9JM58 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Crlf1Q9JM58 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.21■□□□□ 0.51
Crlf1Q9JM58 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crlf1Q9JM58 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.21■□□□□ 0.51
Crlf1Q9JM58 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crlf1Q9JM58 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crlf1Q9JM58 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Crlf1Q9JM58 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Crlf1Q9JM58 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Crlf1Q9JM58 Gm7417-201ENSMUST00000192950 473 ntBASIC18.2■□□□□ 0.5
Crlf1Q9JM58 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crlf1Q9JM58 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crlf1Q9JM58 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crlf1Q9JM58 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crlf1Q9JM58 Gm9847-201ENSMUST00000052528 599 ntBASIC18.19■□□□□ 0.5
Crlf1Q9JM58 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Crlf1Q9JM58 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crlf1Q9JM58 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crlf1Q9JM58 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crlf1Q9JM58 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.18■□□□□ 0.5
Crlf1Q9JM58 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.18■□□□□ 0.5
Crlf1Q9JM58 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crlf1Q9JM58 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.17■□□□□ 0.5
Crlf1Q9JM58 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.17■□□□□ 0.5
Crlf1Q9JM58 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Crlf1Q9JM58 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.17■□□□□ 0.5
Crlf1Q9JM58 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Crlf1Q9JM58 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crlf1Q9JM58 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crlf1Q9JM58 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crlf1Q9JM58 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crlf1Q9JM58 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Crlf1Q9JM58 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crlf1Q9JM58 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Crlf1Q9JM58 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Crlf1Q9JM58 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crlf1Q9JM58 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.14■□□□□ 0.5
Crlf1Q9JM58 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Crlf1Q9JM58 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.14■□□□□ 0.49
Crlf1Q9JM58 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crlf1Q9JM58 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.13■□□□□ 0.49
Crlf1Q9JM58 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crlf1Q9JM58 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crlf1Q9JM58 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crlf1Q9JM58 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crlf1Q9JM58 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Crlf1Q9JM58 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crlf1Q9JM58 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crlf1Q9JM58 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Crlf1Q9JM58 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crlf1Q9JM58 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Crlf1Q9JM58 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Crlf1Q9JM58 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.11■□□□□ 0.49
Crlf1Q9JM58 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Crlf1Q9JM58 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Crlf1Q9JM58 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.1■□□□□ 0.49
Crlf1Q9JM58 Gm21956-201ENSMUST00000179946 522 ntBASIC18.1■□□□□ 0.49
Crlf1Q9JM58 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Crlf1Q9JM58 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crlf1Q9JM58 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Crlf1Q9JM58 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Crlf1Q9JM58 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Crlf1Q9JM58 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Crlf1Q9JM58 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Crlf1Q9JM58 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.08■□□□□ 0.48
Crlf1Q9JM58 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Crlf1Q9JM58 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Crlf1Q9JM58 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Crlf1Q9JM58 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.07■□□□□ 0.48
Crlf1Q9JM58 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.07■□□□□ 0.48
Crlf1Q9JM58 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Crlf1Q9JM58 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Crlf1Q9JM58 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crlf1Q9JM58 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Crlf1Q9JM58 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.06■□□□□ 0.48
Crlf1Q9JM58 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.06■□□□□ 0.48
Crlf1Q9JM58 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Crlf1Q9JM58 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.06■□□□□ 0.48
Crlf1Q9JM58 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Crlf1Q9JM58 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.05■□□□□ 0.48
Crlf1Q9JM58 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Crlf1Q9JM58 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Crlf1Q9JM58 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Crlf1Q9JM58 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crlf1Q9JM58 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Crlf1Q9JM58 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Crlf1Q9JM58 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms