Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ssbp3Q9D032 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ssbp3Q9D032 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ssbp3Q9D032 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ssbp3Q9D032 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ssbp3Q9D032 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ssbp3Q9D032 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssbp3Q9D032 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssbp3Q9D032 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssbp3Q9D032 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.48■□□□□ 0.55
Ssbp3Q9D032 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ssbp3Q9D032 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ssbp3Q9D032 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ssbp3Q9D032 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ssbp3Q9D032 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.47■□□□□ 0.55
Ssbp3Q9D032 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssbp3Q9D032 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssbp3Q9D032 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ssbp3Q9D032 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssbp3Q9D032 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssbp3Q9D032 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssbp3Q9D032 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssbp3Q9D032 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssbp3Q9D032 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssbp3Q9D032 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ssbp3Q9D032 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ssbp3Q9D032 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssbp3Q9D032 Gm10420-201ENSMUST00000121713 882 ntBASIC18.44■□□□□ 0.54
Ssbp3Q9D032 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ssbp3Q9D032 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssbp3Q9D032 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssbp3Q9D032 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ssbp3Q9D032 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ssbp3Q9D032 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ssbp3Q9D032 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Ssbp3Q9D032 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssbp3Q9D032 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.43■□□□□ 0.54
Ssbp3Q9D032 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
Ssbp3Q9D032 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssbp3Q9D032 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Ssbp3Q9D032 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.42■□□□□ 0.54
Ssbp3Q9D032 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ssbp3Q9D032 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.42■□□□□ 0.54
Ssbp3Q9D032 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssbp3Q9D032 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssbp3Q9D032 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Ssbp3Q9D032 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ssbp3Q9D032 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssbp3Q9D032 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.41■□□□□ 0.54
Ssbp3Q9D032 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.41■□□□□ 0.54
Ssbp3Q9D032 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssbp3Q9D032 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ssbp3Q9D032 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.4■□□□□ 0.54
Ssbp3Q9D032 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.4■□□□□ 0.54
Ssbp3Q9D032 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.4■□□□□ 0.54
Ssbp3Q9D032 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssbp3Q9D032 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssbp3Q9D032 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssbp3Q9D032 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssbp3Q9D032 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssbp3Q9D032 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ssbp3Q9D032 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ssbp3Q9D032 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssbp3Q9D032 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ssbp3Q9D032 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssbp3Q9D032 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ssbp3Q9D032 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssbp3Q9D032 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssbp3Q9D032 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ssbp3Q9D032 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssbp3Q9D032 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssbp3Q9D032 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ssbp3Q9D032 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssbp3Q9D032 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssbp3Q9D032 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssbp3Q9D032 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ssbp3Q9D032 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.35■□□□□ 0.53
Ssbp3Q9D032 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.35■□□□□ 0.53
Ssbp3Q9D032 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssbp3Q9D032 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.35■□□□□ 0.53
Ssbp3Q9D032 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssbp3Q9D032 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ssbp3Q9D032 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssbp3Q9D032 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.35■□□□□ 0.53
Ssbp3Q9D032 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssbp3Q9D032 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssbp3Q9D032 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.34■□□□□ 0.53
Ssbp3Q9D032 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssbp3Q9D032 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ssbp3Q9D032 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms