Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cotl1Q9CQI6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cotl1Q9CQI6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cotl1Q9CQI6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cotl1Q9CQI6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Cotl1Q9CQI6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cotl1Q9CQI6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.27■□□□□ 0.36
Cotl1Q9CQI6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cotl1Q9CQI6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cotl1Q9CQI6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cotl1Q9CQI6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.27■□□□□ 0.35
Cotl1Q9CQI6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Cotl1Q9CQI6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cotl1Q9CQI6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cotl1Q9CQI6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cotl1Q9CQI6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cotl1Q9CQI6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cotl1Q9CQI6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cotl1Q9CQI6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cotl1Q9CQI6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cotl1Q9CQI6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cotl1Q9CQI6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cotl1Q9CQI6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Cotl1Q9CQI6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cotl1Q9CQI6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cotl1Q9CQI6 Gm45855-201ENSMUST00000212546 880 ntBASIC17.24■□□□□ 0.35
Cotl1Q9CQI6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cotl1Q9CQI6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cotl1Q9CQI6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cotl1Q9CQI6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cotl1Q9CQI6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cotl1Q9CQI6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Cotl1Q9CQI6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cotl1Q9CQI6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cotl1Q9CQI6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cotl1Q9CQI6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cotl1Q9CQI6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cotl1Q9CQI6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cotl1Q9CQI6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Cotl1Q9CQI6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cotl1Q9CQI6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cotl1Q9CQI6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.21■□□□□ 0.35
Cotl1Q9CQI6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.21■□□□□ 0.35
Cotl1Q9CQI6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cotl1Q9CQI6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cotl1Q9CQI6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cotl1Q9CQI6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cotl1Q9CQI6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cotl1Q9CQI6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cotl1Q9CQI6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cotl1Q9CQI6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cotl1Q9CQI6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.2■□□□□ 0.34
Cotl1Q9CQI6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cotl1Q9CQI6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cotl1Q9CQI6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cotl1Q9CQI6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cotl1Q9CQI6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cotl1Q9CQI6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cotl1Q9CQI6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cotl1Q9CQI6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cotl1Q9CQI6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cotl1Q9CQI6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.17■□□□□ 0.34
Cotl1Q9CQI6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cotl1Q9CQI6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cotl1Q9CQI6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cotl1Q9CQI6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cotl1Q9CQI6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cotl1Q9CQI6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cotl1Q9CQI6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cotl1Q9CQI6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cotl1Q9CQI6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cotl1Q9CQI6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cotl1Q9CQI6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cotl1Q9CQI6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cotl1Q9CQI6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cotl1Q9CQI6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cotl1Q9CQI6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cotl1Q9CQI6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cotl1Q9CQI6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cotl1Q9CQI6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cotl1Q9CQI6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cotl1Q9CQI6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cotl1Q9CQI6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.14■□□□□ 0.33
Cotl1Q9CQI6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cotl1Q9CQI6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cotl1Q9CQI6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cotl1Q9CQI6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cotl1Q9CQI6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cotl1Q9CQI6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cotl1Q9CQI6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cotl1Q9CQI6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cotl1Q9CQI6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.13■□□□□ 0.33
Cotl1Q9CQI6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cotl1Q9CQI6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Cotl1Q9CQI6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms