Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdca3Q99M54 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.55■□□□□ 0.88
Cdca3Q99M54 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdca3Q99M54 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdca3Q99M54 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.54■□□□□ 0.88
Cdca3Q99M54 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdca3Q99M54 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdca3Q99M54 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdca3Q99M54 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdca3Q99M54 Gm22567-201ENSMUST00000175542 342 ntBASIC20.52■□□□□ 0.88
Cdca3Q99M54 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdca3Q99M54 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdca3Q99M54 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdca3Q99M54 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cdca3Q99M54 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdca3Q99M54 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdca3Q99M54 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdca3Q99M54 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.49■□□□□ 0.87
Cdca3Q99M54 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdca3Q99M54 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdca3Q99M54 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdca3Q99M54 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdca3Q99M54 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdca3Q99M54 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.48■□□□□ 0.87
Cdca3Q99M54 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdca3Q99M54 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cdca3Q99M54 Gm37136-201ENSMUST00000194368 194 ntBASIC20.47■□□□□ 0.87
Cdca3Q99M54 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdca3Q99M54 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdca3Q99M54 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdca3Q99M54 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cdca3Q99M54 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.45■□□□□ 0.86
Cdca3Q99M54 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdca3Q99M54 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.45■□□□□ 0.86
Cdca3Q99M54 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdca3Q99M54 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Cdca3Q99M54 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdca3Q99M54 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdca3Q99M54 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdca3Q99M54 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.43■□□□□ 0.86
Cdca3Q99M54 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdca3Q99M54 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cdca3Q99M54 Gm5812-201ENSMUST00000061073 957 ntBASIC20.43■□□□□ 0.86
Cdca3Q99M54 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdca3Q99M54 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdca3Q99M54 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdca3Q99M54 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdca3Q99M54 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.42■□□□□ 0.86
Cdca3Q99M54 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdca3Q99M54 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdca3Q99M54 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdca3Q99M54 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdca3Q99M54 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdca3Q99M54 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdca3Q99M54 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.39■□□□□ 0.85
Cdca3Q99M54 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdca3Q99M54 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdca3Q99M54 Gm10420-201ENSMUST00000121713 882 ntBASIC20.38■□□□□ 0.85
Cdca3Q99M54 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdca3Q99M54 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Cdca3Q99M54 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.37■□□□□ 0.85
Cdca3Q99M54 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdca3Q99M54 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms