Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H1fooQ8VIK3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
H1fooQ8VIK3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.59■□□□□ 0.57
H1fooQ8VIK3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H1fooQ8VIK3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
H1fooQ8VIK3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H1fooQ8VIK3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H1fooQ8VIK3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H1fooQ8VIK3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.58■□□□□ 0.56
H1fooQ8VIK3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
H1fooQ8VIK3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H1fooQ8VIK3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H1fooQ8VIK3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H1fooQ8VIK3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H1fooQ8VIK3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.57■□□□□ 0.56
H1fooQ8VIK3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H1fooQ8VIK3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H1fooQ8VIK3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H1fooQ8VIK3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H1fooQ8VIK3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H1fooQ8VIK3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H1fooQ8VIK3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
H1fooQ8VIK3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H1fooQ8VIK3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H1fooQ8VIK3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
H1fooQ8VIK3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.55■□□□□ 0.56
H1fooQ8VIK3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H1fooQ8VIK3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.54■□□□□ 0.56
H1fooQ8VIK3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.54■□□□□ 0.56
H1fooQ8VIK3 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.54■□□□□ 0.56
H1fooQ8VIK3 Terc-201ENSMUST00000082862 423 ntBASIC18.54■□□□□ 0.56
H1fooQ8VIK3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.54■□□□□ 0.56
H1fooQ8VIK3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H1fooQ8VIK3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H1fooQ8VIK3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H1fooQ8VIK3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
H1fooQ8VIK3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
H1fooQ8VIK3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
H1fooQ8VIK3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H1fooQ8VIK3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
H1fooQ8VIK3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
H1fooQ8VIK3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.52■□□□□ 0.56
H1fooQ8VIK3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H1fooQ8VIK3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H1fooQ8VIK3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
H1fooQ8VIK3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
H1fooQ8VIK3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
H1fooQ8VIK3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
H1fooQ8VIK3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H1fooQ8VIK3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
H1fooQ8VIK3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H1fooQ8VIK3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H1fooQ8VIK3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
H1fooQ8VIK3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H1fooQ8VIK3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H1fooQ8VIK3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H1fooQ8VIK3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.5■□□□□ 0.55
H1fooQ8VIK3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.5■□□□□ 0.55
H1fooQ8VIK3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.5■□□□□ 0.55
H1fooQ8VIK3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H1fooQ8VIK3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
H1fooQ8VIK3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H1fooQ8VIK3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.49■□□□□ 0.55
H1fooQ8VIK3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H1fooQ8VIK3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
H1fooQ8VIK3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H1fooQ8VIK3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
H1fooQ8VIK3 Gm6311-201ENSMUST00000073790 878 ntBASIC18.48■□□□□ 0.55
H1fooQ8VIK3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H1fooQ8VIK3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H1fooQ8VIK3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.48■□□□□ 0.55
H1fooQ8VIK3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H1fooQ8VIK3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H1fooQ8VIK3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.47■□□□□ 0.55
H1fooQ8VIK3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H1fooQ8VIK3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H1fooQ8VIK3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
H1fooQ8VIK3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H1fooQ8VIK3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H1fooQ8VIK3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H1fooQ8VIK3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.45■□□□□ 0.54
H1fooQ8VIK3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H1fooQ8VIK3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H1fooQ8VIK3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
H1fooQ8VIK3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H1fooQ8VIK3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H1fooQ8VIK3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H1fooQ8VIK3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H1fooQ8VIK3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
H1fooQ8VIK3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H1fooQ8VIK3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H1fooQ8VIK3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
H1fooQ8VIK3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
H1fooQ8VIK3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
H1fooQ8VIK3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.43■□□□□ 0.54
H1fooQ8VIK3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H1fooQ8VIK3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H1fooQ8VIK3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H1fooQ8VIK3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
H1fooQ8VIK3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms