Protein–RNA interactions for Protein: Q8VH31

Rfpl4a, Ret finger protein-like 4A, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4aQ8VH31 Gm15820-201ENSMUST00000201566 728 ntBASIC21.25■□□□□ 0.99
Rfpl4aQ8VH31 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfpl4aQ8VH31 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfpl4aQ8VH31 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfpl4aQ8VH31 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.24■□□□□ 0.99
Rfpl4aQ8VH31 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfpl4aQ8VH31 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rfpl4aQ8VH31 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.24■□□□□ 0.99
Rfpl4aQ8VH31 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.24■□□□□ 0.99
Rfpl4aQ8VH31 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.24■□□□□ 0.99
Rfpl4aQ8VH31 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfpl4aQ8VH31 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfpl4aQ8VH31 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.23■□□□□ 0.99
Rfpl4aQ8VH31 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.23■□□□□ 0.99
Rfpl4aQ8VH31 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfpl4aQ8VH31 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.23■□□□□ 0.99
Rfpl4aQ8VH31 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rfpl4aQ8VH31 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Rfpl4aQ8VH31 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfpl4aQ8VH31 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.21■□□□□ 0.99
Rfpl4aQ8VH31 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.21■□□□□ 0.99
Rfpl4aQ8VH31 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfpl4aQ8VH31 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfpl4aQ8VH31 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rfpl4aQ8VH31 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rfpl4aQ8VH31 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rfpl4aQ8VH31 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rfpl4aQ8VH31 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.2■□□□□ 0.98
Rfpl4aQ8VH31 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rfpl4aQ8VH31 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Rfpl4aQ8VH31 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfpl4aQ8VH31 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rfpl4aQ8VH31 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.19■□□□□ 0.98
Rfpl4aQ8VH31 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfpl4aQ8VH31 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rfpl4aQ8VH31 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfpl4aQ8VH31 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfpl4aQ8VH31 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.18■□□□□ 0.98
Rfpl4aQ8VH31 Rps24-207ENSMUST00000224568 714 ntBASIC21.18■□□□□ 0.98
Rfpl4aQ8VH31 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfpl4aQ8VH31 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rfpl4aQ8VH31 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfpl4aQ8VH31 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfpl4aQ8VH31 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfpl4aQ8VH31 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rfpl4aQ8VH31 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rfpl4aQ8VH31 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfpl4aQ8VH31 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfpl4aQ8VH31 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfpl4aQ8VH31 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfpl4aQ8VH31 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rfpl4aQ8VH31 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.16■□□□□ 0.98
Rfpl4aQ8VH31 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfpl4aQ8VH31 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfpl4aQ8VH31 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rfpl4aQ8VH31 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfpl4aQ8VH31 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfpl4aQ8VH31 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rfpl4aQ8VH31 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Rfpl4aQ8VH31 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.13■□□□□ 0.97
Rfpl4aQ8VH31 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rfpl4aQ8VH31 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfpl4aQ8VH31 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfpl4aQ8VH31 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.12■□□□□ 0.97
Rfpl4aQ8VH31 Gm45102-201ENSMUST00000207427 857 ntBASIC21.12■□□□□ 0.97
Rfpl4aQ8VH31 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rfpl4aQ8VH31 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfpl4aQ8VH31 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Rfpl4aQ8VH31 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rfpl4aQ8VH31 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfpl4aQ8VH31 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rfpl4aQ8VH31 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.1■□□□□ 0.97
Rfpl4aQ8VH31 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfpl4aQ8VH31 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rfpl4aQ8VH31 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfpl4aQ8VH31 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfpl4aQ8VH31 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfpl4aQ8VH31 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfpl4aQ8VH31 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfpl4aQ8VH31 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.09■□□□□ 0.97
Rfpl4aQ8VH31 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.09■□□□□ 0.97
Rfpl4aQ8VH31 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfpl4aQ8VH31 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfpl4aQ8VH31 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfpl4aQ8VH31 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rfpl4aQ8VH31 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfpl4aQ8VH31 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rfpl4aQ8VH31 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfpl4aQ8VH31 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms