Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Sh3kbp1Q8R550 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3kbp1Q8R550 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Sh3kbp1Q8R550 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Sh3kbp1Q8R550 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sh3kbp1Q8R550 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.93■■□□□ 1.26
Sh3kbp1Q8R550 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sh3kbp1Q8R550 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sh3kbp1Q8R550 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Sh3kbp1Q8R550 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sh3kbp1Q8R550 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3kbp1Q8R550 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Sh3kbp1Q8R550 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3kbp1Q8R550 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3kbp1Q8R550 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3kbp1Q8R550 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sh3kbp1Q8R550 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.9■■□□□ 1.26
Sh3kbp1Q8R550 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.9■■□□□ 1.26
Sh3kbp1Q8R550 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.9■■□□□ 1.26
Sh3kbp1Q8R550 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3kbp1Q8R550 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sh3kbp1Q8R550 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.9■■□□□ 1.26
Sh3kbp1Q8R550 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Sh3kbp1Q8R550 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sh3kbp1Q8R550 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Sh3kbp1Q8R550 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sh3kbp1Q8R550 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.88■■□□□ 1.25
Sh3kbp1Q8R550 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3kbp1Q8R550 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3kbp1Q8R550 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3kbp1Q8R550 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3kbp1Q8R550 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3kbp1Q8R550 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3kbp1Q8R550 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3kbp1Q8R550 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3kbp1Q8R550 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3kbp1Q8R550 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3kbp1Q8R550 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.86■■□□□ 1.25
Sh3kbp1Q8R550 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3kbp1Q8R550 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3kbp1Q8R550 Gm10420-201ENSMUST00000121713 882 ntBASIC22.85■■□□□ 1.25
Sh3kbp1Q8R550 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3kbp1Q8R550 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3kbp1Q8R550 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3kbp1Q8R550 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3kbp1Q8R550 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3kbp1Q8R550 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3kbp1Q8R550 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3kbp1Q8R550 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sh3kbp1Q8R550 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sh3kbp1Q8R550 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sh3kbp1Q8R550 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sh3kbp1Q8R550 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Sh3kbp1Q8R550 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Sh3kbp1Q8R550 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Sh3kbp1Q8R550 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sh3kbp1Q8R550 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Sh3kbp1Q8R550 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.8■■□□□ 1.24
Sh3kbp1Q8R550 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Sh3kbp1Q8R550 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3kbp1Q8R550 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.79■■□□□ 1.24
Sh3kbp1Q8R550 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Sh3kbp1Q8R550 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.78■■□□□ 1.24
Sh3kbp1Q8R550 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sh3kbp1Q8R550 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sh3kbp1Q8R550 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3kbp1Q8R550 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3kbp1Q8R550 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.77■■□□□ 1.24
Sh3kbp1Q8R550 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3kbp1Q8R550 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.77■■□□□ 1.24
Sh3kbp1Q8R550 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
Sh3kbp1Q8R550 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3kbp1Q8R550 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh3kbp1Q8R550 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh3kbp1Q8R550 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh3kbp1Q8R550 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Sh3kbp1Q8R550 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3kbp1Q8R550 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3kbp1Q8R550 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3kbp1Q8R550 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3kbp1Q8R550 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.74■■□□□ 1.23
Sh3kbp1Q8R550 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3kbp1Q8R550 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Sh3kbp1Q8R550 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sh3kbp1Q8R550 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sh3kbp1Q8R550 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.73■■□□□ 1.23
Sh3kbp1Q8R550 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sh3kbp1Q8R550 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sh3kbp1Q8R550 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sh3kbp1Q8R550 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3kbp1Q8R550 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3kbp1Q8R550 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Sh3kbp1Q8R550 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.71■■□□□ 1.23
Sh3kbp1Q8R550 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3kbp1Q8R550 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.71■■□□□ 1.23
Sh3kbp1Q8R550 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3kbp1Q8R550 Gm44428-201ENSMUST00000204474 874 ntBASIC22.7■■□□□ 1.22
Sh3kbp1Q8R550 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3kbp1Q8R550 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Sh3kbp1Q8R550 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms