Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdt1Q8R4E9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Cdt1Q8R4E9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdt1Q8R4E9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdt1Q8R4E9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdt1Q8R4E9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdt1Q8R4E9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdt1Q8R4E9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Cdt1Q8R4E9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cdt1Q8R4E9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Cdt1Q8R4E9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdt1Q8R4E9 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.48■■□□□ 1.03
Cdt1Q8R4E9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdt1Q8R4E9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdt1Q8R4E9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdt1Q8R4E9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdt1Q8R4E9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.47■■□□□ 1.03
Cdt1Q8R4E9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Cdt1Q8R4E9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdt1Q8R4E9 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.45■■□□□ 1.02
Cdt1Q8R4E9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdt1Q8R4E9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdt1Q8R4E9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Cdt1Q8R4E9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.44■■□□□ 1.02
Cdt1Q8R4E9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdt1Q8R4E9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdt1Q8R4E9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Cdt1Q8R4E9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdt1Q8R4E9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.43■■□□□ 1.02
Cdt1Q8R4E9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdt1Q8R4E9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cdt1Q8R4E9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdt1Q8R4E9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdt1Q8R4E9 Gm10420-201ENSMUST00000121713 882 ntBASIC21.42■■□□□ 1.02
Cdt1Q8R4E9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.42■■□□□ 1.02
Cdt1Q8R4E9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cdt1Q8R4E9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cdt1Q8R4E9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdt1Q8R4E9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdt1Q8R4E9 Terc-201ENSMUST00000082862 423 ntBASIC21.42■■□□□ 1.02
Cdt1Q8R4E9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.41■■□□□ 1.02
Cdt1Q8R4E9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdt1Q8R4E9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cdt1Q8R4E9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdt1Q8R4E9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdt1Q8R4E9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdt1Q8R4E9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdt1Q8R4E9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdt1Q8R4E9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdt1Q8R4E9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Cdt1Q8R4E9 Gm5921-201ENSMUST00000075898 882 ntBASIC21.4■■□□□ 1.02
Cdt1Q8R4E9 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.4■■□□□ 1.02
Cdt1Q8R4E9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdt1Q8R4E9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdt1Q8R4E9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.39■■□□□ 1.01
Cdt1Q8R4E9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdt1Q8R4E9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdt1Q8R4E9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdt1Q8R4E9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdt1Q8R4E9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdt1Q8R4E9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdt1Q8R4E9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdt1Q8R4E9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.38■■□□□ 1.01
Cdt1Q8R4E9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.38■■□□□ 1.01
Cdt1Q8R4E9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdt1Q8R4E9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdt1Q8R4E9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdt1Q8R4E9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.38■■□□□ 1.01
Cdt1Q8R4E9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdt1Q8R4E9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdt1Q8R4E9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdt1Q8R4E9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdt1Q8R4E9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdt1Q8R4E9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdt1Q8R4E9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdt1Q8R4E9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.36■■□□□ 1.01
Cdt1Q8R4E9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdt1Q8R4E9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdt1Q8R4E9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdt1Q8R4E9 Gm15546-201ENSMUST00000122095 826 ntBASIC21.35■■□□□ 1.01
Cdt1Q8R4E9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Cdt1Q8R4E9 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.35■■□□□ 1.01
Cdt1Q8R4E9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cdt1Q8R4E9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdt1Q8R4E9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.34■■□□□ 1.01
Cdt1Q8R4E9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cdt1Q8R4E9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdt1Q8R4E9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdt1Q8R4E9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms