Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc58Q8R3Q6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc58Q8R3Q6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc58Q8R3Q6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.88■□□□□ 0.77
Ccdc58Q8R3Q6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc58Q8R3Q6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc58Q8R3Q6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc58Q8R3Q6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc58Q8R3Q6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc58Q8R3Q6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc58Q8R3Q6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc58Q8R3Q6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc58Q8R3Q6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc58Q8R3Q6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc58Q8R3Q6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc58Q8R3Q6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.85■□□□□ 0.77
Ccdc58Q8R3Q6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc58Q8R3Q6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc58Q8R3Q6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc58Q8R3Q6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc58Q8R3Q6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc58Q8R3Q6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc58Q8R3Q6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc58Q8R3Q6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc58Q8R3Q6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc58Q8R3Q6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc58Q8R3Q6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc58Q8R3Q6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ccdc58Q8R3Q6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc58Q8R3Q6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc58Q8R3Q6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc58Q8R3Q6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc58Q8R3Q6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc58Q8R3Q6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc58Q8R3Q6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc58Q8R3Q6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ccdc58Q8R3Q6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc58Q8R3Q6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Ccdc58Q8R3Q6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc58Q8R3Q6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc58Q8R3Q6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc58Q8R3Q6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc58Q8R3Q6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc58Q8R3Q6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc58Q8R3Q6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc58Q8R3Q6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc58Q8R3Q6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc58Q8R3Q6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc58Q8R3Q6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc58Q8R3Q6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc58Q8R3Q6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc58Q8R3Q6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc58Q8R3Q6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc58Q8R3Q6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc58Q8R3Q6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc58Q8R3Q6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc58Q8R3Q6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc58Q8R3Q6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc58Q8R3Q6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc58Q8R3Q6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc58Q8R3Q6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc58Q8R3Q6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc58Q8R3Q6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc58Q8R3Q6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc58Q8R3Q6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Ccdc58Q8R3Q6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc58Q8R3Q6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc58Q8R3Q6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc58Q8R3Q6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc58Q8R3Q6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ccdc58Q8R3Q6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc58Q8R3Q6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Ccdc58Q8R3Q6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ccdc58Q8R3Q6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc58Q8R3Q6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ccdc58Q8R3Q6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc58Q8R3Q6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc58Q8R3Q6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Ccdc58Q8R3Q6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc58Q8R3Q6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc58Q8R3Q6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc58Q8R3Q6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc58Q8R3Q6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc58Q8R3Q6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc58Q8R3Q6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc58Q8R3Q6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc58Q8R3Q6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc58Q8R3Q6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc58Q8R3Q6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc58Q8R3Q6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc58Q8R3Q6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc58Q8R3Q6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc58Q8R3Q6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc58Q8R3Q6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccdc58Q8R3Q6 Gm37136-201ENSMUST00000194368 194 ntBASIC19.69■□□□□ 0.74
Ccdc58Q8R3Q6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc58Q8R3Q6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc58Q8R3Q6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc58Q8R3Q6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc58Q8R3Q6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms