Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pdlim2Q8R1G6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pdlim2Q8R1G6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Pdlim2Q8R1G6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Pdlim2Q8R1G6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.09■■□□□ 1.77
Pdlim2Q8R1G6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Pdlim2Q8R1G6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pdlim2Q8R1G6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Pdlim2Q8R1G6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pdlim2Q8R1G6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pdlim2Q8R1G6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pdlim2Q8R1G6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Pdlim2Q8R1G6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pdlim2Q8R1G6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Pdlim2Q8R1G6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pdlim2Q8R1G6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pdlim2Q8R1G6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pdlim2Q8R1G6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pdlim2Q8R1G6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pdlim2Q8R1G6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pdlim2Q8R1G6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pdlim2Q8R1G6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pdlim2Q8R1G6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pdlim2Q8R1G6 Gm12504-201ENSMUST00000120860 2231 ntBASIC26.04■■□□□ 1.76
Pdlim2Q8R1G6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Pdlim2Q8R1G6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pdlim2Q8R1G6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC26.04■■□□□ 1.76
Pdlim2Q8R1G6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Pdlim2Q8R1G6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pdlim2Q8R1G6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pdlim2Q8R1G6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pdlim2Q8R1G6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pdlim2Q8R1G6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pdlim2Q8R1G6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pdlim2Q8R1G6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pdlim2Q8R1G6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pdlim2Q8R1G6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pdlim2Q8R1G6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pdlim2Q8R1G6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.99■■□□□ 1.75
Pdlim2Q8R1G6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pdlim2Q8R1G6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pdlim2Q8R1G6 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.98■■□□□ 1.75
Pdlim2Q8R1G6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pdlim2Q8R1G6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Pdlim2Q8R1G6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pdlim2Q8R1G6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pdlim2Q8R1G6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pdlim2Q8R1G6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pdlim2Q8R1G6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Pdlim2Q8R1G6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pdlim2Q8R1G6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pdlim2Q8R1G6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Pdlim2Q8R1G6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pdlim2Q8R1G6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Pdlim2Q8R1G6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Pdlim2Q8R1G6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
Pdlim2Q8R1G6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
Pdlim2Q8R1G6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pdlim2Q8R1G6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Pdlim2Q8R1G6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pdlim2Q8R1G6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pdlim2Q8R1G6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pdlim2Q8R1G6 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.95■■□□□ 1.74
Pdlim2Q8R1G6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
Pdlim2Q8R1G6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pdlim2Q8R1G6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.94■■□□□ 1.74
Pdlim2Q8R1G6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pdlim2Q8R1G6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pdlim2Q8R1G6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Pdlim2Q8R1G6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pdlim2Q8R1G6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pdlim2Q8R1G6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pdlim2Q8R1G6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Pdlim2Q8R1G6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Pdlim2Q8R1G6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC25.91■■□□□ 1.74
Pdlim2Q8R1G6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pdlim2Q8R1G6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pdlim2Q8R1G6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Pdlim2Q8R1G6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Pdlim2Q8R1G6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Pdlim2Q8R1G6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC25.89■■□□□ 1.74
Pdlim2Q8R1G6 Gm30023-201ENSMUST00000197970 889 ntBASIC25.89■■□□□ 1.74
Pdlim2Q8R1G6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pdlim2Q8R1G6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Pdlim2Q8R1G6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Pdlim2Q8R1G6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pdlim2Q8R1G6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pdlim2Q8R1G6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pdlim2Q8R1G6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pdlim2Q8R1G6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.88■■□□□ 1.73
Pdlim2Q8R1G6 Gm10616-201ENSMUST00000205285 2127 ntBASIC25.86■■□□□ 1.73
Pdlim2Q8R1G6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pdlim2Q8R1G6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pdlim2Q8R1G6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pdlim2Q8R1G6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Pdlim2Q8R1G6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pdlim2Q8R1G6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pdlim2Q8R1G6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pdlim2Q8R1G6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pdlim2Q8R1G6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms