Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.34■■□□□ 1.81
Cchcr1Q8K2I2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Cchcr1Q8K2I2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cchcr1Q8K2I2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.33■■□□□ 1.81
Cchcr1Q8K2I2 Gm45364-201ENSMUST00000210883 159 ntBASIC26.33■■□□□ 1.81
Cchcr1Q8K2I2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Cchcr1Q8K2I2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cchcr1Q8K2I2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cchcr1Q8K2I2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cchcr1Q8K2I2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Cchcr1Q8K2I2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.31■■□□□ 1.8
Cchcr1Q8K2I2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cchcr1Q8K2I2 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.3■■□□□ 1.8
Cchcr1Q8K2I2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cchcr1Q8K2I2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.3■■□□□ 1.8
Cchcr1Q8K2I2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Cchcr1Q8K2I2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Cchcr1Q8K2I2 Terc-201ENSMUST00000082862 423 ntBASIC26.29■■□□□ 1.8
Cchcr1Q8K2I2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cchcr1Q8K2I2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cchcr1Q8K2I2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cchcr1Q8K2I2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cchcr1Q8K2I2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cchcr1Q8K2I2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Cchcr1Q8K2I2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cchcr1Q8K2I2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Cchcr1Q8K2I2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cchcr1Q8K2I2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cchcr1Q8K2I2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cchcr1Q8K2I2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cchcr1Q8K2I2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.26■■□□□ 1.79
Cchcr1Q8K2I2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cchcr1Q8K2I2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cchcr1Q8K2I2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cchcr1Q8K2I2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cchcr1Q8K2I2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.25■■□□□ 1.79
Cchcr1Q8K2I2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cchcr1Q8K2I2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cchcr1Q8K2I2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Cchcr1Q8K2I2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.23■■□□□ 1.79
Cchcr1Q8K2I2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cchcr1Q8K2I2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.23■■□□□ 1.79
Cchcr1Q8K2I2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cchcr1Q8K2I2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
Cchcr1Q8K2I2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cchcr1Q8K2I2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.22■■□□□ 1.79
Cchcr1Q8K2I2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cchcr1Q8K2I2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cchcr1Q8K2I2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cchcr1Q8K2I2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cchcr1Q8K2I2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cchcr1Q8K2I2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Cchcr1Q8K2I2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Cchcr1Q8K2I2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Cchcr1Q8K2I2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.79
Cchcr1Q8K2I2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Cchcr1Q8K2I2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.2■■□□□ 1.78
Cchcr1Q8K2I2 Gm17641-201ENSMUST00000166328 2350 ntBASIC26.2■■□□□ 1.78
Cchcr1Q8K2I2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Cchcr1Q8K2I2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cchcr1Q8K2I2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cchcr1Q8K2I2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.19■■□□□ 1.78
Cchcr1Q8K2I2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cchcr1Q8K2I2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Cchcr1Q8K2I2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Cchcr1Q8K2I2 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.18■■□□□ 1.78
Cchcr1Q8K2I2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.18■■□□□ 1.78
Cchcr1Q8K2I2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cchcr1Q8K2I2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Cchcr1Q8K2I2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cchcr1Q8K2I2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cchcr1Q8K2I2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Cchcr1Q8K2I2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cchcr1Q8K2I2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cchcr1Q8K2I2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cchcr1Q8K2I2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cchcr1Q8K2I2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Cchcr1Q8K2I2 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.17■■□□□ 1.78
Cchcr1Q8K2I2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cchcr1Q8K2I2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.16■■□□□ 1.78
Cchcr1Q8K2I2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cchcr1Q8K2I2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cchcr1Q8K2I2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cchcr1Q8K2I2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Cchcr1Q8K2I2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Cchcr1Q8K2I2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Cchcr1Q8K2I2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Cchcr1Q8K2I2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.15■■□□□ 1.78
Cchcr1Q8K2I2 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.15■■□□□ 1.78
Cchcr1Q8K2I2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.14■■□□□ 1.78
Cchcr1Q8K2I2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cchcr1Q8K2I2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cchcr1Q8K2I2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cchcr1Q8K2I2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Cchcr1Q8K2I2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Cchcr1Q8K2I2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC26.14■■□□□ 1.77
Cchcr1Q8K2I2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cchcr1Q8K2I2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cchcr1Q8K2I2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cchcr1Q8K2I2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms