Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
Csnka2ipQ8CH19 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Csnka2ipQ8CH19 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Csnka2ipQ8CH19 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Csnka2ipQ8CH19 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Csnka2ipQ8CH19 Gm44428-201ENSMUST00000204474 874 ntBASIC21.02■□□□□ 0.96
Csnka2ipQ8CH19 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Csnka2ipQ8CH19 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Csnka2ipQ8CH19 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Csnka2ipQ8CH19 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Csnka2ipQ8CH19 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Csnka2ipQ8CH19 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Csnka2ipQ8CH19 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Csnka2ipQ8CH19 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.01■□□□□ 0.95
Csnka2ipQ8CH19 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Csnka2ipQ8CH19 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Csnka2ipQ8CH19 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21■□□□□ 0.95
Csnka2ipQ8CH19 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Csnka2ipQ8CH19 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Csnka2ipQ8CH19 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Csnka2ipQ8CH19 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Csnka2ipQ8CH19 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Csnka2ipQ8CH19 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.99■□□□□ 0.95
Csnka2ipQ8CH19 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Csnka2ipQ8CH19 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Csnka2ipQ8CH19 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Csnka2ipQ8CH19 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Csnka2ipQ8CH19 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Csnka2ipQ8CH19 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Csnka2ipQ8CH19 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Csnka2ipQ8CH19 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Csnka2ipQ8CH19 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Csnka2ipQ8CH19 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Csnka2ipQ8CH19 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Csnka2ipQ8CH19 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.97■□□□□ 0.95
Csnka2ipQ8CH19 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Csnka2ipQ8CH19 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Csnka2ipQ8CH19 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Csnka2ipQ8CH19 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Csnka2ipQ8CH19 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Csnka2ipQ8CH19 Gm10420-201ENSMUST00000121713 882 ntBASIC20.96■□□□□ 0.95
Csnka2ipQ8CH19 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.96■□□□□ 0.95
Csnka2ipQ8CH19 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.96■□□□□ 0.95
Csnka2ipQ8CH19 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnka2ipQ8CH19 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnka2ipQ8CH19 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnka2ipQ8CH19 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Csnka2ipQ8CH19 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Csnka2ipQ8CH19 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Csnka2ipQ8CH19 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.94■□□□□ 0.94
Csnka2ipQ8CH19 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnka2ipQ8CH19 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Csnka2ipQ8CH19 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Csnka2ipQ8CH19 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Csnka2ipQ8CH19 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.92■□□□□ 0.94
Csnka2ipQ8CH19 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Csnka2ipQ8CH19 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Csnka2ipQ8CH19 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Csnka2ipQ8CH19 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Csnka2ipQ8CH19 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Csnka2ipQ8CH19 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Csnka2ipQ8CH19 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Csnka2ipQ8CH19 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Csnka2ipQ8CH19 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.9■□□□□ 0.94
Csnka2ipQ8CH19 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Csnka2ipQ8CH19 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Csnka2ipQ8CH19 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Csnka2ipQ8CH19 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.89■□□□□ 0.94
Csnka2ipQ8CH19 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.89■□□□□ 0.93
Csnka2ipQ8CH19 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Csnka2ipQ8CH19 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.89■□□□□ 0.93
Csnka2ipQ8CH19 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.89■□□□□ 0.93
Csnka2ipQ8CH19 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Csnka2ipQ8CH19 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Csnka2ipQ8CH19 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Csnka2ipQ8CH19 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Csnka2ipQ8CH19 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Csnka2ipQ8CH19 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Csnka2ipQ8CH19 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Csnka2ipQ8CH19 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Csnka2ipQ8CH19 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Csnka2ipQ8CH19 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Csnka2ipQ8CH19 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Csnka2ipQ8CH19 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Csnka2ipQ8CH19 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Csnka2ipQ8CH19 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Csnka2ipQ8CH19 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Csnka2ipQ8CH19 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Csnka2ipQ8CH19 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms