Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trim52Q8CDV4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Trim52Q8CDV4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Trim52Q8CDV4 Gm43566-201ENSMUST00000196851 808 ntBASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Trim52Q8CDV4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Trim52Q8CDV4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Trim52Q8CDV4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC28.14■■■□□ 2.1
Trim52Q8CDV4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Trim52Q8CDV4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.13■■■□□ 2.09
Trim52Q8CDV4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
Trim52Q8CDV4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Gm45444-201ENSMUST00000211394 898 ntBASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Trim52Q8CDV4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trim52Q8CDV4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trim52Q8CDV4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trim52Q8CDV4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Gm15546-201ENSMUST00000122095 826 ntBASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Trim52Q8CDV4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Gm5522-201ENSMUST00000189483 1242 ntBASIC28.09■■■□□ 2.09
Trim52Q8CDV4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Trim52Q8CDV4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trim52Q8CDV4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC28.08■■■□□ 2.09
Trim52Q8CDV4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trim52Q8CDV4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trim52Q8CDV4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trim52Q8CDV4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trim52Q8CDV4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC28.07■■■□□ 2.08
Trim52Q8CDV4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trim52Q8CDV4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trim52Q8CDV4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Trim52Q8CDV4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC28.06■■■□□ 2.08
Trim52Q8CDV4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Trim52Q8CDV4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Trim52Q8CDV4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trim52Q8CDV4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trim52Q8CDV4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Trim52Q8CDV4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Trim52Q8CDV4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Trim52Q8CDV4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
Trim52Q8CDV4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Trim52Q8CDV4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.08
Trim52Q8CDV4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Trim52Q8CDV4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Trim52Q8CDV4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC28.01■■■□□ 2.07
Trim52Q8CDV4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trim52Q8CDV4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Trim52Q8CDV4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28■■■□□ 2.07
Trim52Q8CDV4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trim52Q8CDV4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Trim52Q8CDV4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Trim52Q8CDV4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Trim52Q8CDV4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC27.99■■■□□ 2.07
Trim52Q8CDV4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
Trim52Q8CDV4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Trim52Q8CDV4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC27.97■■■□□ 2.07
Trim52Q8CDV4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Trim52Q8CDV4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Trim52Q8CDV4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Trim52Q8CDV4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.97■■■□□ 2.07
Trim52Q8CDV4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
Trim52Q8CDV4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Trim52Q8CDV4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
Trim52Q8CDV4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trim52Q8CDV4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trim52Q8CDV4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trim52Q8CDV4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trim52Q8CDV4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.94■■■□□ 2.06
Trim52Q8CDV4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Trim52Q8CDV4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC27.93■■■□□ 2.06
Trim52Q8CDV4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Trim52Q8CDV4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms