Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Alx1Q8C8B0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Alx1Q8C8B0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.44■■□□□ 1.82
Alx1Q8C8B0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.43■■□□□ 1.82
Alx1Q8C8B0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Alx1Q8C8B0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Alx1Q8C8B0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Alx1Q8C8B0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Alx1Q8C8B0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.42■■□□□ 1.82
Alx1Q8C8B0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Alx1Q8C8B0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Alx1Q8C8B0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Alx1Q8C8B0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Alx1Q8C8B0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.41■■□□□ 1.82
Alx1Q8C8B0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Alx1Q8C8B0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
Alx1Q8C8B0 Gm7332-201ENSMUST00000118351 454 ntBASIC26.4■■□□□ 1.82
Alx1Q8C8B0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Alx1Q8C8B0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Alx1Q8C8B0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Alx1Q8C8B0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Alx1Q8C8B0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Alx1Q8C8B0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.39■■□□□ 1.82
Alx1Q8C8B0 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.39■■□□□ 1.82
Alx1Q8C8B0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Alx1Q8C8B0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Alx1Q8C8B0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Alx1Q8C8B0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Alx1Q8C8B0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Alx1Q8C8B0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Alx1Q8C8B0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Alx1Q8C8B0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Alx1Q8C8B0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Alx1Q8C8B0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.36■■□□□ 1.81
Alx1Q8C8B0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Alx1Q8C8B0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Alx1Q8C8B0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Alx1Q8C8B0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Alx1Q8C8B0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Alx1Q8C8B0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Alx1Q8C8B0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Alx1Q8C8B0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Alx1Q8C8B0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
Alx1Q8C8B0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Alx1Q8C8B0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Alx1Q8C8B0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Alx1Q8C8B0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.32■■□□□ 1.8
Alx1Q8C8B0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Alx1Q8C8B0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Alx1Q8C8B0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Alx1Q8C8B0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Alx1Q8C8B0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Alx1Q8C8B0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Alx1Q8C8B0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Alx1Q8C8B0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Alx1Q8C8B0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
Alx1Q8C8B0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Alx1Q8C8B0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Alx1Q8C8B0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Alx1Q8C8B0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Alx1Q8C8B0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Alx1Q8C8B0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Alx1Q8C8B0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.28■■□□□ 1.8
Alx1Q8C8B0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
Alx1Q8C8B0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Alx1Q8C8B0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Alx1Q8C8B0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Alx1Q8C8B0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Alx1Q8C8B0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Alx1Q8C8B0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.26■■□□□ 1.79
Alx1Q8C8B0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Alx1Q8C8B0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Alx1Q8C8B0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Alx1Q8C8B0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Alx1Q8C8B0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Alx1Q8C8B0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Alx1Q8C8B0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Alx1Q8C8B0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Alx1Q8C8B0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Alx1Q8C8B0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Alx1Q8C8B0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.24■■□□□ 1.79
Alx1Q8C8B0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Alx1Q8C8B0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Alx1Q8C8B0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Alx1Q8C8B0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.23■■□□□ 1.79
Alx1Q8C8B0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Alx1Q8C8B0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Alx1Q8C8B0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Alx1Q8C8B0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.23■■□□□ 1.79
Alx1Q8C8B0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Alx1Q8C8B0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Alx1Q8C8B0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Alx1Q8C8B0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Alx1Q8C8B0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Alx1Q8C8B0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Alx1Q8C8B0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Alx1Q8C8B0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Alx1Q8C8B0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Alx1Q8C8B0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Alx1Q8C8B0 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms