Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srrm4Q8BKA3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srrm4Q8BKA3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Srrm4Q8BKA3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Srrm4Q8BKA3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srrm4Q8BKA3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srrm4Q8BKA3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Srrm4Q8BKA3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Srrm4Q8BKA3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.28■□□□□ 0.68
Srrm4Q8BKA3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm4Q8BKA3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm4Q8BKA3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm4Q8BKA3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm4Q8BKA3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm4Q8BKA3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm4Q8BKA3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srrm4Q8BKA3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Srrm4Q8BKA3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Srrm4Q8BKA3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Srrm4Q8BKA3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Srrm4Q8BKA3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Srrm4Q8BKA3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Srrm4Q8BKA3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Srrm4Q8BKA3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.26■□□□□ 0.67
Srrm4Q8BKA3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Srrm4Q8BKA3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Srrm4Q8BKA3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srrm4Q8BKA3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Srrm4Q8BKA3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.25■□□□□ 0.67
Srrm4Q8BKA3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srrm4Q8BKA3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srrm4Q8BKA3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Srrm4Q8BKA3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Srrm4Q8BKA3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Srrm4Q8BKA3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Srrm4Q8BKA3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Srrm4Q8BKA3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srrm4Q8BKA3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.23■□□□□ 0.67
Srrm4Q8BKA3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srrm4Q8BKA3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Srrm4Q8BKA3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.23■□□□□ 0.67
Srrm4Q8BKA3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srrm4Q8BKA3 Cap2-205ENSMUST00000225824 1634 ntBASIC19.22■□□□□ 0.67
Srrm4Q8BKA3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srrm4Q8BKA3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Srrm4Q8BKA3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Srrm4Q8BKA3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srrm4Q8BKA3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Srrm4Q8BKA3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.21■□□□□ 0.67
Srrm4Q8BKA3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srrm4Q8BKA3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.21■□□□□ 0.67
Srrm4Q8BKA3 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.21■□□□□ 0.67
Srrm4Q8BKA3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srrm4Q8BKA3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Srrm4Q8BKA3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm4Q8BKA3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm4Q8BKA3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm4Q8BKA3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.2■□□□□ 0.66
Srrm4Q8BKA3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm4Q8BKA3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.2■□□□□ 0.66
Srrm4Q8BKA3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm4Q8BKA3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm4Q8BKA3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm4Q8BKA3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm4Q8BKA3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm4Q8BKA3 Gm27502-201ENSMUST00000183495 199 ntBASIC19.19■□□□□ 0.66
Srrm4Q8BKA3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm4Q8BKA3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm4Q8BKA3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm4Q8BKA3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Gm12366-201ENSMUST00000121722 873 ntBASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Gm5786-201ENSMUST00000085368 882 ntBASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm4Q8BKA3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.17■□□□□ 0.66
Srrm4Q8BKA3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm4Q8BKA3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm4Q8BKA3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm4Q8BKA3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm4Q8BKA3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm4Q8BKA3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm4Q8BKA3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm4Q8BKA3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm4Q8BKA3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm4Q8BKA3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm4Q8BKA3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Srrm4Q8BKA3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.15■□□□□ 0.66
Srrm4Q8BKA3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm4Q8BKA3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm4Q8BKA3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm4Q8BKA3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm4Q8BKA3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms