Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clrn3Q8BHH8 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.8■□□□□ 0.92
Clrn3Q8BHH8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clrn3Q8BHH8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn3Q8BHH8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn3Q8BHH8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn3Q8BHH8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn3Q8BHH8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clrn3Q8BHH8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.79■□□□□ 0.92
Clrn3Q8BHH8 Terc-201ENSMUST00000082862 423 ntBASIC20.79■□□□□ 0.92
Clrn3Q8BHH8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn3Q8BHH8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn3Q8BHH8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.78■□□□□ 0.92
Clrn3Q8BHH8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.78■□□□□ 0.92
Clrn3Q8BHH8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.78■□□□□ 0.92
Clrn3Q8BHH8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Clrn3Q8BHH8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Clrn3Q8BHH8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Clrn3Q8BHH8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
Clrn3Q8BHH8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clrn3Q8BHH8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clrn3Q8BHH8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn3Q8BHH8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn3Q8BHH8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn3Q8BHH8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn3Q8BHH8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.76■□□□□ 0.91
Clrn3Q8BHH8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn3Q8BHH8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Clrn3Q8BHH8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn3Q8BHH8 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.76■□□□□ 0.91
Clrn3Q8BHH8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn3Q8BHH8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Clrn3Q8BHH8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn3Q8BHH8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Clrn3Q8BHH8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn3Q8BHH8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn3Q8BHH8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.75■□□□□ 0.91
Clrn3Q8BHH8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn3Q8BHH8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn3Q8BHH8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Clrn3Q8BHH8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.74■□□□□ 0.91
Clrn3Q8BHH8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.74■□□□□ 0.91
Clrn3Q8BHH8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clrn3Q8BHH8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clrn3Q8BHH8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clrn3Q8BHH8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.73■□□□□ 0.91
Clrn3Q8BHH8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clrn3Q8BHH8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clrn3Q8BHH8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clrn3Q8BHH8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clrn3Q8BHH8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clrn3Q8BHH8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.72■□□□□ 0.91
Clrn3Q8BHH8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clrn3Q8BHH8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Clrn3Q8BHH8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Clrn3Q8BHH8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clrn3Q8BHH8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clrn3Q8BHH8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.69■□□□□ 0.9
Clrn3Q8BHH8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clrn3Q8BHH8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.69■□□□□ 0.9
Clrn3Q8BHH8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Clrn3Q8BHH8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn3Q8BHH8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn3Q8BHH8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn3Q8BHH8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn3Q8BHH8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn3Q8BHH8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clrn3Q8BHH8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.67■□□□□ 0.9
Clrn3Q8BHH8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clrn3Q8BHH8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clrn3Q8BHH8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.67■□□□□ 0.9
Clrn3Q8BHH8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.67■□□□□ 0.9
Clrn3Q8BHH8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clrn3Q8BHH8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Clrn3Q8BHH8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.66■□□□□ 0.9
Clrn3Q8BHH8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clrn3Q8BHH8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Clrn3Q8BHH8 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.65■□□□□ 0.9
Clrn3Q8BHH8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn3Q8BHH8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Clrn3Q8BHH8 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.65■□□□□ 0.9
Clrn3Q8BHH8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn3Q8BHH8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn3Q8BHH8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn3Q8BHH8 Gm9806-201ENSMUST00000051080 552 ntBASIC20.65■□□□□ 0.9
Clrn3Q8BHH8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clrn3Q8BHH8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms