Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC28.52■■■□□ 2.16
Clcn1Q64347 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Clcn1Q64347 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Clcn1Q64347 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
Clcn1Q64347 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Clcn1Q64347 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Clcn1Q64347 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
Clcn1Q64347 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Clcn1Q64347 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Clcn1Q64347 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Clcn1Q64347 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Clcn1Q64347 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Clcn1Q64347 Gm45444-201ENSMUST00000211394 898 ntBASIC28.49■■■□□ 2.15
Clcn1Q64347 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.49■■■□□ 2.15
Clcn1Q64347 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Clcn1Q64347 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Clcn1Q64347 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Clcn1Q64347 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Clcn1Q64347 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Clcn1Q64347 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Clcn1Q64347 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.47■■■□□ 2.15
Clcn1Q64347 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Clcn1Q64347 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Clcn1Q64347 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Clcn1Q64347 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC28.46■■■□□ 2.15
Clcn1Q64347 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
Clcn1Q64347 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Clcn1Q64347 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
Clcn1Q64347 Rps24-207ENSMUST00000224568 714 ntBASIC28.45■■■□□ 2.14
Clcn1Q64347 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC28.45■■■□□ 2.14
Clcn1Q64347 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Clcn1Q64347 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Clcn1Q64347 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Clcn1Q64347 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Clcn1Q64347 Gm14117-201ENSMUST00000122417 843 ntBASIC28.44■■■□□ 2.14
Clcn1Q64347 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC28.44■■■□□ 2.14
Clcn1Q64347 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Clcn1Q64347 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Clcn1Q64347 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Clcn1Q64347 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Clcn1Q64347 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.43■■■□□ 2.14
Clcn1Q64347 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Clcn1Q64347 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Clcn1Q64347 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC28.41■■■□□ 2.14
Clcn1Q64347 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
Clcn1Q64347 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
Clcn1Q64347 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Clcn1Q64347 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Clcn1Q64347 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.4■■■□□ 2.14
Clcn1Q64347 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC28.4■■■□□ 2.14
Clcn1Q64347 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Clcn1Q64347 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
Clcn1Q64347 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.4■■■□□ 2.14
Clcn1Q64347 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Clcn1Q64347 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Clcn1Q64347 Gm45102-201ENSMUST00000207427 857 ntBASIC28.39■■■□□ 2.14
Clcn1Q64347 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Clcn1Q64347 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Clcn1Q64347 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Clcn1Q64347 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Clcn1Q64347 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC28.37■■■□□ 2.13
Clcn1Q64347 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Clcn1Q64347 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Clcn1Q64347 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Clcn1Q64347 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Clcn1Q64347 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
Clcn1Q64347 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Clcn1Q64347 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Clcn1Q64347 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Clcn1Q64347 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Clcn1Q64347 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
Clcn1Q64347 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.35■■■□□ 2.13
Clcn1Q64347 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
Clcn1Q64347 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Clcn1Q64347 Gm9959-201ENSMUST00000068277 390 ntBASIC28.35■■■□□ 2.13
Clcn1Q64347 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Clcn1Q64347 AC164433.2-201ENSMUST00000226346 1701 ntBASIC28.35■■■□□ 2.13
Clcn1Q64347 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC28.34■■■□□ 2.13
Clcn1Q64347 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC28.34■■■□□ 2.13
Clcn1Q64347 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC28.34■■■□□ 2.13
Clcn1Q64347 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Clcn1Q64347 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Clcn1Q64347 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Clcn1Q64347 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Clcn1Q64347 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
Clcn1Q64347 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Clcn1Q64347 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Clcn1Q64347 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Clcn1Q64347 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Clcn1Q64347 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Clcn1Q64347 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Clcn1Q64347 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Clcn1Q64347 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Clcn1Q64347 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Clcn1Q64347 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms