Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SpenQ62504 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SpenQ62504 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SpenQ62504 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SpenQ62504 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SpenQ62504 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SpenQ62504 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SpenQ62504 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SpenQ62504 Gm44428-201ENSMUST00000204474 874 ntBASIC20.4■□□□□ 0.86
SpenQ62504 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SpenQ62504 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.4■□□□□ 0.86
SpenQ62504 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.4■□□□□ 0.86
SpenQ62504 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SpenQ62504 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SpenQ62504 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SpenQ62504 Gm10232-201ENSMUST00000089221 720 ntBASIC20.39■□□□□ 0.86
SpenQ62504 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SpenQ62504 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SpenQ62504 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SpenQ62504 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.38■□□□□ 0.85
SpenQ62504 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SpenQ62504 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.37■□□□□ 0.85
SpenQ62504 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SpenQ62504 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SpenQ62504 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SpenQ62504 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.36■□□□□ 0.85
SpenQ62504 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.36■□□□□ 0.85
SpenQ62504 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SpenQ62504 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SpenQ62504 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SpenQ62504 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SpenQ62504 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SpenQ62504 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.35■□□□□ 0.85
SpenQ62504 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.35■□□□□ 0.85
SpenQ62504 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.35■□□□□ 0.85
SpenQ62504 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SpenQ62504 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SpenQ62504 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SpenQ62504 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SpenQ62504 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SpenQ62504 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SpenQ62504 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SpenQ62504 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SpenQ62504 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.33■□□□□ 0.85
SpenQ62504 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.33■□□□□ 0.84
SpenQ62504 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SpenQ62504 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.32■□□□□ 0.84
SpenQ62504 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SpenQ62504 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SpenQ62504 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.31■□□□□ 0.84
SpenQ62504 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpenQ62504 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpenQ62504 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpenQ62504 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SpenQ62504 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SpenQ62504 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SpenQ62504 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SpenQ62504 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SpenQ62504 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.29■□□□□ 0.84
SpenQ62504 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.28■□□□□ 0.84
SpenQ62504 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SpenQ62504 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.28■□□□□ 0.84
SpenQ62504 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.28■□□□□ 0.84
SpenQ62504 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SpenQ62504 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SpenQ62504 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SpenQ62504 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SpenQ62504 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
SpenQ62504 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SpenQ62504 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SpenQ62504 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SpenQ62504 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SpenQ62504 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SpenQ62504 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SpenQ62504 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SpenQ62504 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SpenQ62504 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SpenQ62504 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SpenQ62504 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SpenQ62504 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SpenQ62504 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.25■□□□□ 0.83
SpenQ62504 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.25■□□□□ 0.83
SpenQ62504 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SpenQ62504 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SpenQ62504 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SpenQ62504 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SpenQ62504 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SpenQ62504 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SpenQ62504 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SpenQ62504 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SpenQ62504 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SpenQ62504 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SpenQ62504 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SpenQ62504 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SpenQ62504 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.22■□□□□ 0.83
SpenQ62504 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.22■□□□□ 0.83
SpenQ62504 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SpenQ62504 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SpenQ62504 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.21■□□□□ 0.83
SpenQ62504 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 169.3 ms