Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
AtmQ62388 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.75■■□□□ 1.07
AtmQ62388 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.75■■□□□ 1.07
AtmQ62388 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
AtmQ62388 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
AtmQ62388 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
AtmQ62388 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AtmQ62388 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.74■■□□□ 1.07
AtmQ62388 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AtmQ62388 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
AtmQ62388 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
AtmQ62388 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AtmQ62388 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AtmQ62388 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
AtmQ62388 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AtmQ62388 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AtmQ62388 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
AtmQ62388 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AtmQ62388 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
AtmQ62388 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.71■■□□□ 1.07
AtmQ62388 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
AtmQ62388 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
AtmQ62388 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AtmQ62388 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AtmQ62388 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AtmQ62388 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AtmQ62388 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.69■■□□□ 1.06
AtmQ62388 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.69■■□□□ 1.06
AtmQ62388 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
AtmQ62388 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
AtmQ62388 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.69■■□□□ 1.06
AtmQ62388 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
AtmQ62388 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
AtmQ62388 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
AtmQ62388 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
AtmQ62388 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
AtmQ62388 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
AtmQ62388 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.67■■□□□ 1.06
AtmQ62388 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
AtmQ62388 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
AtmQ62388 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
AtmQ62388 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.66■■□□□ 1.06
AtmQ62388 Gm10232-201ENSMUST00000089221 720 ntBASIC21.66■■□□□ 1.06
AtmQ62388 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AtmQ62388 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
AtmQ62388 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AtmQ62388 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.65■■□□□ 1.06
AtmQ62388 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AtmQ62388 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
AtmQ62388 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.64■■□□□ 1.06
AtmQ62388 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
AtmQ62388 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
AtmQ62388 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
AtmQ62388 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AtmQ62388 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
AtmQ62388 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
AtmQ62388 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
AtmQ62388 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AtmQ62388 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
AtmQ62388 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
AtmQ62388 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AtmQ62388 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.61■■□□□ 1.05
AtmQ62388 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.61■■□□□ 1.05
AtmQ62388 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AtmQ62388 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AtmQ62388 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AtmQ62388 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AtmQ62388 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
AtmQ62388 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
AtmQ62388 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
AtmQ62388 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.59■■□□□ 1.05
AtmQ62388 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.58■■□□□ 1.05
AtmQ62388 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
AtmQ62388 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
AtmQ62388 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
AtmQ62388 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
AtmQ62388 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.57■■□□□ 1.04
AtmQ62388 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
AtmQ62388 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AtmQ62388 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
AtmQ62388 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AtmQ62388 Gm9847-201ENSMUST00000052528 599 ntBASIC21.56■■□□□ 1.04
AtmQ62388 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
AtmQ62388 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.55■■□□□ 1.04
AtmQ62388 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.55■■□□□ 1.04
AtmQ62388 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AtmQ62388 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AtmQ62388 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
AtmQ62388 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.54■■□□□ 1.04
AtmQ62388 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.54■■□□□ 1.04
AtmQ62388 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AtmQ62388 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
AtmQ62388 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AtmQ62388 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AtmQ62388 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.53■■□□□ 1.04
AtmQ62388 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
AtmQ62388 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
AtmQ62388 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.52■■□□□ 1.04
AtmQ62388 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
AtmQ62388 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms