Protein–RNA interactions for Protein: Q60987

Foxg1, Forkhead box protein G1, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxg1Q60987 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxg1Q60987 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxg1Q60987 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Foxg1Q60987 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxg1Q60987 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Foxg1Q60987 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Foxg1Q60987 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxg1Q60987 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Foxg1Q60987 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Foxg1Q60987 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Foxg1Q60987 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Foxg1Q60987 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Foxg1Q60987 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.49■□□□□ 0.71
Foxg1Q60987 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxg1Q60987 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Foxg1Q60987 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxg1Q60987 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxg1Q60987 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Foxg1Q60987 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Foxg1Q60987 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxg1Q60987 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Foxg1Q60987 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Foxg1Q60987 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.47■□□□□ 0.71
Foxg1Q60987 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxg1Q60987 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxg1Q60987 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxg1Q60987 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.46■□□□□ 0.71
Foxg1Q60987 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxg1Q60987 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxg1Q60987 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxg1Q60987 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxg1Q60987 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Foxg1Q60987 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.45■□□□□ 0.7
Foxg1Q60987 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Foxg1Q60987 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.45■□□□□ 0.7
Foxg1Q60987 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxg1Q60987 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Foxg1Q60987 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxg1Q60987 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Foxg1Q60987 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxg1Q60987 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxg1Q60987 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxg1Q60987 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.44■□□□□ 0.7
Foxg1Q60987 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxg1Q60987 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Foxg1Q60987 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxg1Q60987 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Foxg1Q60987 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxg1Q60987 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxg1Q60987 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.43■□□□□ 0.7
Foxg1Q60987 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxg1Q60987 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxg1Q60987 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxg1Q60987 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxg1Q60987 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Foxg1Q60987 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxg1Q60987 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.41■□□□□ 0.7
Foxg1Q60987 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.41■□□□□ 0.7
Foxg1Q60987 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.41■□□□□ 0.7
Foxg1Q60987 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxg1Q60987 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxg1Q60987 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxg1Q60987 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Foxg1Q60987 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.4■□□□□ 0.7
Foxg1Q60987 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxg1Q60987 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
Foxg1Q60987 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxg1Q60987 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxg1Q60987 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxg1Q60987 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxg1Q60987 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Foxg1Q60987 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxg1Q60987 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxg1Q60987 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxg1Q60987 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxg1Q60987 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.38■□□□□ 0.69
Foxg1Q60987 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Foxg1Q60987 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxg1Q60987 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Foxg1Q60987 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxg1Q60987 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxg1Q60987 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxg1Q60987 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxg1Q60987 Gm10420-201ENSMUST00000121713 882 ntBASIC19.36■□□□□ 0.69
Foxg1Q60987 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Foxg1Q60987 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxg1Q60987 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxg1Q60987 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxg1Q60987 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Foxg1Q60987 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.35■□□□□ 0.69
Foxg1Q60987 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.35■□□□□ 0.69
Foxg1Q60987 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Foxg1Q60987 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Foxg1Q60987 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxg1Q60987 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxg1Q60987 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.34■□□□□ 0.69
Foxg1Q60987 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Foxg1Q60987 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Foxg1Q60987 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxg1Q60987 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 1608 ms