Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Tnfaip3Q60769 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tnfaip3Q60769 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.95■□□□□ 0.94
Tnfaip3Q60769 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfaip3Q60769 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfaip3Q60769 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfaip3Q60769 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfaip3Q60769 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfaip3Q60769 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfaip3Q60769 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Tnfaip3Q60769 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfaip3Q60769 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tnfaip3Q60769 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfaip3Q60769 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.93■□□□□ 0.94
Tnfaip3Q60769 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Tnfaip3Q60769 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfaip3Q60769 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfaip3Q60769 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfaip3Q60769 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.92■□□□□ 0.94
Tnfaip3Q60769 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Tnfaip3Q60769 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfaip3Q60769 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfaip3Q60769 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfaip3Q60769 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfaip3Q60769 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfaip3Q60769 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.91■□□□□ 0.94
Tnfaip3Q60769 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tnfaip3Q60769 Gm10420-201ENSMUST00000121713 882 ntBASIC20.9■□□□□ 0.94
Tnfaip3Q60769 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfaip3Q60769 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tnfaip3Q60769 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfaip3Q60769 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfaip3Q60769 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfaip3Q60769 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tnfaip3Q60769 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfaip3Q60769 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfaip3Q60769 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfaip3Q60769 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.87■□□□□ 0.93
Tnfaip3Q60769 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfaip3Q60769 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.87■□□□□ 0.93
Tnfaip3Q60769 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfaip3Q60769 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.87■□□□□ 0.93
Tnfaip3Q60769 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.87■□□□□ 0.93
Tnfaip3Q60769 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfaip3Q60769 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfaip3Q60769 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfaip3Q60769 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.86■□□□□ 0.93
Tnfaip3Q60769 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfaip3Q60769 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfaip3Q60769 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfaip3Q60769 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Tnfaip3Q60769 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfaip3Q60769 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.85■□□□□ 0.93
Tnfaip3Q60769 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfaip3Q60769 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Tnfaip3Q60769 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfaip3Q60769 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfaip3Q60769 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfaip3Q60769 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfaip3Q60769 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfaip3Q60769 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.83■□□□□ 0.93
Tnfaip3Q60769 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Tnfaip3Q60769 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfaip3Q60769 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Tnfaip3Q60769 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.82■□□□□ 0.92
Tnfaip3Q60769 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Tnfaip3Q60769 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfaip3Q60769 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfaip3Q60769 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfaip3Q60769 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfaip3Q60769 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfaip3Q60769 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfaip3Q60769 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfaip3Q60769 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfaip3Q60769 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.8■□□□□ 0.92
Tnfaip3Q60769 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfaip3Q60769 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.8■□□□□ 0.92
Tnfaip3Q60769 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.79■□□□□ 0.92
Tnfaip3Q60769 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tnfaip3Q60769 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfaip3Q60769 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfaip3Q60769 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfaip3Q60769 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Tnfaip3Q60769 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfaip3Q60769 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfaip3Q60769 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfaip3Q60769 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfaip3Q60769 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms