Protein–RNA interactions for Protein: Q3V0X1

Smim9, Small integral membrane protein 9, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim9Q3V0X1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smim9Q3V0X1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim9Q3V0X1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim9Q3V0X1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smim9Q3V0X1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim9Q3V0X1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim9Q3V0X1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim9Q3V0X1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Smim9Q3V0X1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Smim9Q3V0X1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smim9Q3V0X1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim9Q3V0X1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim9Q3V0X1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim9Q3V0X1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smim9Q3V0X1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Smim9Q3V0X1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smim9Q3V0X1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim9Q3V0X1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smim9Q3V0X1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Smim9Q3V0X1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim9Q3V0X1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smim9Q3V0X1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim9Q3V0X1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim9Q3V0X1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smim9Q3V0X1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim9Q3V0X1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim9Q3V0X1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smim9Q3V0X1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Smim9Q3V0X1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim9Q3V0X1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smim9Q3V0X1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim9Q3V0X1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim9Q3V0X1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.16■□□□□ 0.34
Smim9Q3V0X1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.16■□□□□ 0.34
Smim9Q3V0X1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim9Q3V0X1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smim9Q3V0X1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Smim9Q3V0X1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim9Q3V0X1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Smim9Q3V0X1 Gm16148-201ENSMUST00000119653 893 ntBASIC17.15■□□□□ 0.34
Smim9Q3V0X1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim9Q3V0X1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smim9Q3V0X1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smim9Q3V0X1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.14■□□□□ 0.34
Smim9Q3V0X1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim9Q3V0X1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim9Q3V0X1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim9Q3V0X1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim9Q3V0X1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smim9Q3V0X1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.14■□□□□ 0.33
Smim9Q3V0X1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Smim9Q3V0X1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.13■□□□□ 0.33
Smim9Q3V0X1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Smim9Q3V0X1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim9Q3V0X1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim9Q3V0X1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim9Q3V0X1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim9Q3V0X1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim9Q3V0X1 Gm8109-201ENSMUST00000194076 746 ntBASIC17.12■□□□□ 0.33
Smim9Q3V0X1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim9Q3V0X1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smim9Q3V0X1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim9Q3V0X1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smim9Q3V0X1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim9Q3V0X1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim9Q3V0X1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smim9Q3V0X1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim9Q3V0X1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim9Q3V0X1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim9Q3V0X1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim9Q3V0X1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim9Q3V0X1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim9Q3V0X1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.1■□□□□ 0.33
Smim9Q3V0X1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim9Q3V0X1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim9Q3V0X1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smim9Q3V0X1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smim9Q3V0X1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smim9Q3V0X1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim9Q3V0X1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms