Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcd3P55096 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Abcd3P55096 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.94■□□□□ 0.78
Abcd3P55096 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Abcd3P55096 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Abcd3P55096 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Abcd3P55096 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcd3P55096 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Abcd3P55096 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Abcd3P55096 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Abcd3P55096 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.92■□□□□ 0.78
Abcd3P55096 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Abcd3P55096 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Abcd3P55096 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.92■□□□□ 0.78
Abcd3P55096 Gm6311-201ENSMUST00000073790 878 ntBASIC19.92■□□□□ 0.78
Abcd3P55096 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcd3P55096 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abcd3P55096 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abcd3P55096 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Abcd3P55096 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Abcd3P55096 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Abcd3P55096 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.9■□□□□ 0.78
Abcd3P55096 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.9■□□□□ 0.78
Abcd3P55096 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Abcd3P55096 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcd3P55096 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcd3P55096 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abcd3P55096 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Abcd3P55096 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd3P55096 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.89■□□□□ 0.77
Abcd3P55096 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd3P55096 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd3P55096 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd3P55096 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd3P55096 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abcd3P55096 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Abcd3P55096 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcd3P55096 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Abcd3P55096 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Abcd3P55096 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Abcd3P55096 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.87■□□□□ 0.77
Abcd3P55096 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd3P55096 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Abcd3P55096 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd3P55096 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd3P55096 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd3P55096 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Abcd3P55096 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Abcd3P55096 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcd3P55096 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcd3P55096 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcd3P55096 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Abcd3P55096 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.86■□□□□ 0.77
Abcd3P55096 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.86■□□□□ 0.77
Abcd3P55096 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Abcd3P55096 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Abcd3P55096 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abcd3P55096 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abcd3P55096 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abcd3P55096 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.85■□□□□ 0.77
Abcd3P55096 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Abcd3P55096 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abcd3P55096 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.84■□□□□ 0.77
Abcd3P55096 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Abcd3P55096 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.84■□□□□ 0.77
Abcd3P55096 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Abcd3P55096 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.84■□□□□ 0.77
Abcd3P55096 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcd3P55096 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Abcd3P55096 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Abcd3P55096 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.83■□□□□ 0.76
Abcd3P55096 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Abcd3P55096 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Abcd3P55096 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcd3P55096 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.82■□□□□ 0.76
Abcd3P55096 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcd3P55096 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Abcd3P55096 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.82■□□□□ 0.76
Abcd3P55096 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcd3P55096 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.82■□□□□ 0.76
Abcd3P55096 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Abcd3P55096 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcd3P55096 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.81■□□□□ 0.76
Abcd3P55096 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcd3P55096 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcd3P55096 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcd3P55096 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcd3P55096 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.8■□□□□ 0.76
Abcd3P55096 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.8■□□□□ 0.76
Abcd3P55096 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Abcd3P55096 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcd3P55096 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Abcd3P55096 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
Abcd3P55096 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcd3P55096 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcd3P55096 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcd3P55096 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abcd3P55096 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abcd3P55096 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abcd3P55096 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms