Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
Vps4bP46467 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vps4bP46467 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Vps4bP46467 Mir3960-201ENSMUST00000198213 73 ntBASIC22.5■■□□□ 1.19
Vps4bP46467 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Vps4bP46467 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vps4bP46467 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vps4bP46467 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Vps4bP46467 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vps4bP46467 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Vps4bP46467 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vps4bP46467 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vps4bP46467 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vps4bP46467 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Vps4bP46467 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vps4bP46467 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.48■■□□□ 1.19
Vps4bP46467 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Vps4bP46467 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vps4bP46467 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Vps4bP46467 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Vps4bP46467 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Vps4bP46467 Gm11599-201ENSMUST00000118720 878 ntBASIC22.47■■□□□ 1.19
Vps4bP46467 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.47■■□□□ 1.19
Vps4bP46467 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Vps4bP46467 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.47■■□□□ 1.19
Vps4bP46467 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vps4bP46467 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vps4bP46467 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vps4bP46467 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.46■■□□□ 1.19
Vps4bP46467 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vps4bP46467 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.46■■□□□ 1.19
Vps4bP46467 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vps4bP46467 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vps4bP46467 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.45■■□□□ 1.18
Vps4bP46467 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vps4bP46467 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Vps4bP46467 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.44■■□□□ 1.18
Vps4bP46467 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.44■■□□□ 1.18
Vps4bP46467 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.44■■□□□ 1.18
Vps4bP46467 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vps4bP46467 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Vps4bP46467 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Vps4bP46467 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vps4bP46467 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vps4bP46467 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vps4bP46467 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.42■■□□□ 1.18
Vps4bP46467 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Vps4bP46467 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Vps4bP46467 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.41■■□□□ 1.18
Vps4bP46467 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Vps4bP46467 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Vps4bP46467 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Vps4bP46467 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Vps4bP46467 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vps4bP46467 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.39■■□□□ 1.17
Vps4bP46467 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Vps4bP46467 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vps4bP46467 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vps4bP46467 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Vps4bP46467 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Vps4bP46467 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.38■■□□□ 1.17
Vps4bP46467 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.38■■□□□ 1.17
Vps4bP46467 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vps4bP46467 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vps4bP46467 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vps4bP46467 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Vps4bP46467 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Vps4bP46467 Gm45364-201ENSMUST00000210883 159 ntBASIC22.37■■□□□ 1.17
Vps4bP46467 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Vps4bP46467 Terc-201ENSMUST00000082862 423 ntBASIC22.37■■□□□ 1.17
Vps4bP46467 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vps4bP46467 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vps4bP46467 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Vps4bP46467 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vps4bP46467 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Vps4bP46467 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
Vps4bP46467 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vps4bP46467 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vps4bP46467 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vps4bP46467 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vps4bP46467 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Vps4bP46467 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vps4bP46467 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Vps4bP46467 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vps4bP46467 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Vps4bP46467 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vps4bP46467 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Vps4bP46467 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vps4bP46467 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.33■■□□□ 1.16
Vps4bP46467 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Vps4bP46467 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.33■■□□□ 1.16
Vps4bP46467 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.32■■□□□ 1.16
Vps4bP46467 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Vps4bP46467 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vps4bP46467 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vps4bP46467 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.31■■□□□ 1.16
Vps4bP46467 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.31■■□□□ 1.16
Vps4bP46467 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Vps4bP46467 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.31■■□□□ 1.16
Vps4bP46467 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms