Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col4a2P08122 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Col4a2P08122 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Col4a2P08122 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col4a2P08122 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.33■■□□□ 1
Col4a2P08122 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col4a2P08122 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col4a2P08122 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.31■■□□□ 1
Col4a2P08122 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col4a2P08122 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.31■■□□□ 1
Col4a2P08122 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.31■■□□□ 1
Col4a2P08122 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col4a2P08122 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col4a2P08122 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.3■■□□□ 1
Col4a2P08122 Rps24-207ENSMUST00000224568 714 ntBASIC21.3■■□□□ 1
Col4a2P08122 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Col4a2P08122 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.3■■□□□ 1
Col4a2P08122 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col4a2P08122 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Col4a2P08122 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.29■■□□□ 1
Col4a2P08122 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Col4a2P08122 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.28■■□□□ 1
Col4a2P08122 Gm14117-201ENSMUST00000122417 843 ntBASIC21.28■■□□□ 1
Col4a2P08122 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.27■■□□□ 1
Col4a2P08122 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Col4a2P08122 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Col4a2P08122 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Col4a2P08122 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Col4a2P08122 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a2P08122 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a2P08122 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a2P08122 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a2P08122 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col4a2P08122 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a2P08122 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a2P08122 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.25■□□□□ 0.99
Col4a2P08122 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Col4a2P08122 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Col4a2P08122 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a2P08122 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.25■□□□□ 0.99
Col4a2P08122 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a2P08122 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col4a2P08122 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a2P08122 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.24■□□□□ 0.99
Col4a2P08122 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col4a2P08122 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Col4a2P08122 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.24■□□□□ 0.99
Col4a2P08122 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a2P08122 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a2P08122 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Col4a2P08122 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a2P08122 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Col4a2P08122 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.23■□□□□ 0.99
Col4a2P08122 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Col4a2P08122 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col4a2P08122 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Col4a2P08122 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col4a2P08122 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.22■□□□□ 0.99
Col4a2P08122 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.22■□□□□ 0.99
Col4a2P08122 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.22■□□□□ 0.99
Col4a2P08122 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a2P08122 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.21■□□□□ 0.99
Col4a2P08122 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a2P08122 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Col4a2P08122 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.21■□□□□ 0.99
Col4a2P08122 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a2P08122 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col4a2P08122 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a2P08122 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col4a2P08122 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Col4a2P08122 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a2P08122 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a2P08122 Gm45102-201ENSMUST00000207427 857 ntBASIC21.19■□□□□ 0.98
Col4a2P08122 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Col4a2P08122 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Col4a2P08122 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col4a2P08122 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Col4a2P08122 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a2P08122 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a2P08122 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col4a2P08122 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a2P08122 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a2P08122 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a2P08122 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.17■□□□□ 0.98
Col4a2P08122 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col4a2P08122 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.16■□□□□ 0.98
Col4a2P08122 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Col4a2P08122 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a2P08122 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a2P08122 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col4a2P08122 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a2P08122 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a2P08122 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a2P08122 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.15■□□□□ 0.98
Col4a2P08122 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.15■□□□□ 0.98
Col4a2P08122 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col4a2P08122 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col4a2P08122 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.14■□□□□ 0.98
Col4a2P08122 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Col4a2P08122 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms