Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Terc-201ENSMUST00000082862 423 ntBASIC20.65■□□□□ 0.9
Tgfb1P04202 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tgfb1P04202 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tgfb1P04202 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tgfb1P04202 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tgfb1P04202 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Tgfb1P04202 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Tgfb1P04202 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tgfb1P04202 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.63■□□□□ 0.89
Tgfb1P04202 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tgfb1P04202 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.63■□□□□ 0.89
Tgfb1P04202 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.62■□□□□ 0.89
Tgfb1P04202 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.62■□□□□ 0.89
Tgfb1P04202 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tgfb1P04202 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tgfb1P04202 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tgfb1P04202 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.61■□□□□ 0.89
Tgfb1P04202 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tgfb1P04202 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tgfb1P04202 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tgfb1P04202 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tgfb1P04202 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tgfb1P04202 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tgfb1P04202 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tgfb1P04202 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tgfb1P04202 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tgfb1P04202 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tgfb1P04202 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tgfb1P04202 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tgfb1P04202 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tgfb1P04202 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.59■□□□□ 0.89
Tgfb1P04202 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tgfb1P04202 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tgfb1P04202 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tgfb1P04202 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.58■□□□□ 0.89
Tgfb1P04202 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tgfb1P04202 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Tgfb1P04202 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tgfb1P04202 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Tgfb1P04202 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfb1P04202 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfb1P04202 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfb1P04202 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.57■□□□□ 0.88
Tgfb1P04202 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tgfb1P04202 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.57■□□□□ 0.88
Tgfb1P04202 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfb1P04202 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.57■□□□□ 0.88
Tgfb1P04202 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tgfb1P04202 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tgfb1P04202 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tgfb1P04202 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tgfb1P04202 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tgfb1P04202 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Tgfb1P04202 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tgfb1P04202 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfb1P04202 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfb1P04202 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfb1P04202 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfb1P04202 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfb1P04202 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfb1P04202 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tgfb1P04202 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tgfb1P04202 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tgfb1P04202 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tgfb1P04202 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tgfb1P04202 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tgfb1P04202 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfb1P04202 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tgfb1P04202 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tgfb1P04202 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfb1P04202 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.52■□□□□ 0.88
Tgfb1P04202 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfb1P04202 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.52■□□□□ 0.88
Tgfb1P04202 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Tgfb1P04202 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfb1P04202 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tgfb1P04202 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfb1P04202 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.51■□□□□ 0.87
Tgfb1P04202 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfb1P04202 Gm6311-201ENSMUST00000073790 878 ntBASIC20.51■□□□□ 0.87
Tgfb1P04202 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfb1P04202 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfb1P04202 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tgfb1P04202 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.5■□□□□ 0.87
Tgfb1P04202 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfb1P04202 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfb1P04202 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.5■□□□□ 0.87
Tgfb1P04202 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfb1P04202 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfb1P04202 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfb1P04202 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfb1P04202 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tgfb1P04202 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tgfb1P04202 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.5■□□□□ 0.87
Tgfb1P04202 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfb1P04202 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfb1P04202 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfb1P04202 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfb1P04202 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tgfb1P04202 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms