Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1bO55017 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1bO55017 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1bO55017 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1bO55017 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cacna1bO55017 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1bO55017 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1bO55017 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.81■■□□□ 1.08
Cacna1bO55017 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cacna1bO55017 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1bO55017 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Cacna1bO55017 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1bO55017 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cacna1bO55017 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1bO55017 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1bO55017 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1bO55017 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cacna1bO55017 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1bO55017 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1bO55017 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cacna1bO55017 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.78■■□□□ 1.08
Cacna1bO55017 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Cacna1bO55017 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cacna1bO55017 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Cacna1bO55017 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.78■■□□□ 1.08
Cacna1bO55017 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cacna1bO55017 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Cacna1bO55017 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Cacna1bO55017 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Cacna1bO55017 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1bO55017 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cacna1bO55017 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.77■■□□□ 1.08
Cacna1bO55017 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cacna1bO55017 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Cacna1bO55017 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Cacna1bO55017 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1bO55017 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1bO55017 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.76■■□□□ 1.07
Cacna1bO55017 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1bO55017 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1bO55017 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cacna1bO55017 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1bO55017 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1bO55017 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cacna1bO55017 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.75■■□□□ 1.07
Cacna1bO55017 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cacna1bO55017 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cacna1bO55017 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Cacna1bO55017 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.74■■□□□ 1.07
Cacna1bO55017 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1bO55017 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1bO55017 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1bO55017 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cacna1bO55017 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.73■■□□□ 1.07
Cacna1bO55017 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Cacna1bO55017 Etf1-202ENSMUST00000180351 108 ntBASIC21.72■■□□□ 1.07
Cacna1bO55017 Gm13241-201ENSMUST00000094493 780 ntBASIC21.72■■□□□ 1.07
Cacna1bO55017 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1bO55017 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1bO55017 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.71■■□□□ 1.07
Cacna1bO55017 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1bO55017 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cacna1bO55017 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.71■■□□□ 1.07
Cacna1bO55017 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cacna1bO55017 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cacna1bO55017 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.7■■□□□ 1.06
Cacna1bO55017 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cacna1bO55017 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacna1bO55017 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.69■■□□□ 1.06
Cacna1bO55017 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacna1bO55017 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cacna1bO55017 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.69■■□□□ 1.06
Cacna1bO55017 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cacna1bO55017 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Cacna1bO55017 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacna1bO55017 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cacna1bO55017 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Cacna1bO55017 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cacna1bO55017 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.68■■□□□ 1.06
Cacna1bO55017 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.68■■□□□ 1.06
Cacna1bO55017 Gm21956-201ENSMUST00000179946 522 ntBASIC21.68■■□□□ 1.06
Cacna1bO55017 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.68■■□□□ 1.06
Cacna1bO55017 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cacna1bO55017 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cacna1bO55017 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cacna1bO55017 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.67■■□□□ 1.06
Cacna1bO55017 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cacna1bO55017 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cacna1bO55017 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cacna1bO55017 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cacna1bO55017 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1bO55017 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1bO55017 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1bO55017 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1bO55017 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1bO55017 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cacna1bO55017 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cacna1bO55017 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cacna1bO55017 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cacna1bO55017 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms