Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC29.44■■■□□ 2.3
Col15a1O35206 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Col15a1O35206 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Col15a1O35206 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Col15a1O35206 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Col15a1O35206 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Col15a1O35206 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Col15a1O35206 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC29.41■■■□□ 2.3
Col15a1O35206 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Col15a1O35206 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
Col15a1O35206 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Col15a1O35206 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Col15a1O35206 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
Col15a1O35206 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
Col15a1O35206 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Col15a1O35206 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
Col15a1O35206 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Col15a1O35206 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Col15a1O35206 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
Col15a1O35206 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Col15a1O35206 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC29.39■■■□□ 2.29
Col15a1O35206 Gm9959-201ENSMUST00000068277 390 ntBASIC29.39■■■□□ 2.29
Col15a1O35206 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC29.38■■■□□ 2.29
Col15a1O35206 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Col15a1O35206 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Col15a1O35206 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Col15a1O35206 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC29.38■■■□□ 2.29
Col15a1O35206 Fezf2-202ENSMUST00000224023 1917 ntBASIC29.38■■■□□ 2.29
Col15a1O35206 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Col15a1O35206 Gm42501-201ENSMUST00000200220 1026 ntBASIC29.37■■■□□ 2.29
Col15a1O35206 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Col15a1O35206 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC29.37■■■□□ 2.29
Col15a1O35206 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Col15a1O35206 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Col15a1O35206 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Col15a1O35206 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
Col15a1O35206 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC29.36■■■□□ 2.29
Col15a1O35206 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Col15a1O35206 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
Col15a1O35206 AC164433.2-201ENSMUST00000226346 1701 ntBASIC29.35■■■□□ 2.29
Col15a1O35206 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Col15a1O35206 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Col15a1O35206 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Col15a1O35206 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
Col15a1O35206 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Col15a1O35206 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Col15a1O35206 Gm18755-201ENSMUST00000218030 1099 ntBASIC29.33■■■□□ 2.29
Col15a1O35206 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Col15a1O35206 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Col15a1O35206 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Col15a1O35206 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Col15a1O35206 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Col15a1O35206 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Col15a1O35206 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Col15a1O35206 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Col15a1O35206 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC29.28■■■□□ 2.28
Col15a1O35206 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC29.28■■■□□ 2.28
Col15a1O35206 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC29.28■■■□□ 2.28
Col15a1O35206 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC29.28■■■□□ 2.28
Col15a1O35206 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Col15a1O35206 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Col15a1O35206 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Col15a1O35206 Gm7199-201ENSMUST00000118327 1485 ntBASIC29.27■■■□□ 2.28
Col15a1O35206 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC29.26■■■□□ 2.28
Col15a1O35206 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Col15a1O35206 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Col15a1O35206 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
Col15a1O35206 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Col15a1O35206 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Col15a1O35206 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC29.24■■■□□ 2.27
Col15a1O35206 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC29.24■■■□□ 2.27
Col15a1O35206 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Col15a1O35206 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
Col15a1O35206 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Col15a1O35206 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Col15a1O35206 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
Col15a1O35206 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Col15a1O35206 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Col15a1O35206 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Col15a1O35206 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Col15a1O35206 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC29.22■■■□□ 2.27
Col15a1O35206 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Col15a1O35206 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Col15a1O35206 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Col15a1O35206 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Col15a1O35206 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Col15a1O35206 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC29.21■■■□□ 2.27
Col15a1O35206 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Col15a1O35206 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Col15a1O35206 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
Col15a1O35206 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Col15a1O35206 AC122428.3-201ENSMUST00000215551 2290 ntBASIC29.2■■■□□ 2.27
Col15a1O35206 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC29.2■■■□□ 2.27
Col15a1O35206 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Col15a1O35206 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Col15a1O35206 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Col15a1O35206 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Col15a1O35206 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Col15a1O35206 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Col15a1O35206 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC29.18■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms