Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Gm21788J3QNH3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm21788J3QNH3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm21788J3QNH3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm21788J3QNH3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm21788J3QNH3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.79■□□□□ 0.6
Gm21788J3QNH3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm21788J3QNH3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm21788J3QNH3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm21788J3QNH3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gm21788J3QNH3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.78■□□□□ 0.6
Gm21788J3QNH3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm21788J3QNH3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm21788J3QNH3 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.77■□□□□ 0.6
Gm21788J3QNH3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm21788J3QNH3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm21788J3QNH3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Gm21788J3QNH3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm21788J3QNH3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm21788J3QNH3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm21788J3QNH3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm21788J3QNH3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gm21788J3QNH3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm21788J3QNH3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gm21788J3QNH3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm21788J3QNH3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gm21788J3QNH3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gm21788J3QNH3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm21788J3QNH3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.74■□□□□ 0.59
Gm21788J3QNH3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm21788J3QNH3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm21788J3QNH3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm21788J3QNH3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm21788J3QNH3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm21788J3QNH3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm21788J3QNH3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm21788J3QNH3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm21788J3QNH3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.73■□□□□ 0.59
Gm21788J3QNH3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm21788J3QNH3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm21788J3QNH3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm21788J3QNH3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Gm21788J3QNH3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.72■□□□□ 0.59
Gm21788J3QNH3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gm21788J3QNH3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm21788J3QNH3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.72■□□□□ 0.59
Gm21788J3QNH3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm21788J3QNH3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gm21788J3QNH3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm21788J3QNH3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm21788J3QNH3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm21788J3QNH3 Gm45364-201ENSMUST00000210883 159 ntBASIC18.71■□□□□ 0.59
Gm21788J3QNH3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.71■□□□□ 0.59
Gm21788J3QNH3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm21788J3QNH3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm21788J3QNH3 Terc-201ENSMUST00000082862 423 ntBASIC18.7■□□□□ 0.58
Gm21788J3QNH3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm21788J3QNH3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm21788J3QNH3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm21788J3QNH3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm21788J3QNH3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gm21788J3QNH3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm21788J3QNH3 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.68■□□□□ 0.58
Gm21788J3QNH3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm21788J3QNH3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm21788J3QNH3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gm21788J3QNH3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm21788J3QNH3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm21788J3QNH3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm21788J3QNH3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm21788J3QNH3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gm21788J3QNH3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm21788J3QNH3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gm21788J3QNH3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm21788J3QNH3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm21788J3QNH3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm21788J3QNH3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm21788J3QNH3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Gm21788J3QNH3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm21788J3QNH3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm21788J3QNH3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm21788J3QNH3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm21788J3QNH3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm21788J3QNH3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm21788J3QNH3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm21788J3QNH3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.64■□□□□ 0.57
Gm21788J3QNH3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.64■□□□□ 0.57
Gm21788J3QNH3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm21788J3QNH3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.64■□□□□ 0.57
Gm21788J3QNH3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm21788J3QNH3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm21788J3QNH3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Gm21788J3QNH3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm21788J3QNH3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm21788J3QNH3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm21788J3QNH3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm21788J3QNH3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm21788J3QNH3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Gm21788J3QNH3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm21788J3QNH3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms