Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ube4aE9Q735 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ube4aE9Q735 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ube4aE9Q735 Gm5522-201ENSMUST00000189483 1242 ntBASIC27.3■■□□□ 1.96
Ube4aE9Q735 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ube4aE9Q735 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ube4aE9Q735 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ube4aE9Q735 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC27.29■■□□□ 1.96
Ube4aE9Q735 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ube4aE9Q735 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Ube4aE9Q735 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ube4aE9Q735 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC27.28■■□□□ 1.96
Ube4aE9Q735 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ube4aE9Q735 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ube4aE9Q735 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Ube4aE9Q735 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ube4aE9Q735 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.96
Ube4aE9Q735 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ube4aE9Q735 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ube4aE9Q735 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ube4aE9Q735 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC27.26■■□□□ 1.95
Ube4aE9Q735 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ube4aE9Q735 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ube4aE9Q735 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Ube4aE9Q735 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Ube4aE9Q735 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Ube4aE9Q735 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC27.25■■□□□ 1.95
Ube4aE9Q735 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ube4aE9Q735 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Ube4aE9Q735 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC27.24■■□□□ 1.95
Ube4aE9Q735 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ube4aE9Q735 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ube4aE9Q735 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ube4aE9Q735 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ube4aE9Q735 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ube4aE9Q735 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ube4aE9Q735 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Ube4aE9Q735 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ube4aE9Q735 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ube4aE9Q735 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ube4aE9Q735 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ube4aE9Q735 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
Ube4aE9Q735 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ube4aE9Q735 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC27.21■■□□□ 1.95
Ube4aE9Q735 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
Ube4aE9Q735 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ube4aE9Q735 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ube4aE9Q735 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Ube4aE9Q735 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Ube4aE9Q735 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC27.19■■□□□ 1.94
Ube4aE9Q735 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Ube4aE9Q735 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC27.19■■□□□ 1.94
Ube4aE9Q735 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ube4aE9Q735 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ube4aE9Q735 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ube4aE9Q735 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Ube4aE9Q735 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Ube4aE9Q735 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ube4aE9Q735 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ube4aE9Q735 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ube4aE9Q735 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ube4aE9Q735 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ube4aE9Q735 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ube4aE9Q735 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Ube4aE9Q735 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC27.16■■□□□ 1.94
Ube4aE9Q735 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ube4aE9Q735 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Ube4aE9Q735 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ube4aE9Q735 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ube4aE9Q735 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ube4aE9Q735 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ube4aE9Q735 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ube4aE9Q735 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ube4aE9Q735 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC27.13■■□□□ 1.93
Ube4aE9Q735 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC27.13■■□□□ 1.93
Ube4aE9Q735 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC27.13■■□□□ 1.93
Ube4aE9Q735 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC27.13■■□□□ 1.93
Ube4aE9Q735 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Ube4aE9Q735 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Ube4aE9Q735 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ube4aE9Q735 Gm22567-201ENSMUST00000175542 342 ntBASIC27.12■■□□□ 1.93
Ube4aE9Q735 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ube4aE9Q735 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC27.11■■□□□ 1.93
Ube4aE9Q735 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ube4aE9Q735 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ube4aE9Q735 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ube4aE9Q735 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ube4aE9Q735 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ube4aE9Q735 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ube4aE9Q735 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ube4aE9Q735 Gm15820-201ENSMUST00000201566 728 ntBASIC27.08■■□□□ 1.93
Ube4aE9Q735 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC27.08■■□□□ 1.93
Ube4aE9Q735 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ube4aE9Q735 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC27.07■■□□□ 1.92
Ube4aE9Q735 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ube4aE9Q735 AC093043.1-201ENSMUST00000226700 898 ntBASIC27.07■■□□□ 1.92
Ube4aE9Q735 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ube4aE9Q735 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube4aE9Q735 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ube4aE9Q735 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC27.05■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms