Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm37136-201ENSMUST00000194368 194 ntBASIC13.28□□□□□ -0.28
Herc1E9PZP8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Herc1E9PZP8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Herc1E9PZP8 Gm10849-201ENSMUST00000100397 618 ntBASIC13.28□□□□□ -0.28
Herc1E9PZP8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Herc1E9PZP8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Herc1E9PZP8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.28□□□□□ -0.28
Herc1E9PZP8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Herc1E9PZP8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC13.27□□□□□ -0.28
Herc1E9PZP8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Herc1E9PZP8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.27□□□□□ -0.28
Herc1E9PZP8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.27□□□□□ -0.28
Herc1E9PZP8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Herc1E9PZP8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Herc1E9PZP8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.27□□□□□ -0.29
Herc1E9PZP8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Herc1E9PZP8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Herc1E9PZP8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Herc1E9PZP8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Herc1E9PZP8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Herc1E9PZP8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.26□□□□□ -0.29
Herc1E9PZP8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Herc1E9PZP8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Herc1E9PZP8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.26□□□□□ -0.29
Herc1E9PZP8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.26□□□□□ -0.29
Herc1E9PZP8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Herc1E9PZP8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Herc1E9PZP8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Herc1E9PZP8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Herc1E9PZP8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Herc1E9PZP8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Herc1E9PZP8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Herc1E9PZP8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Herc1E9PZP8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Herc1E9PZP8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.25□□□□□ -0.29
Herc1E9PZP8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Herc1E9PZP8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC13.24□□□□□ -0.29
Herc1E9PZP8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Herc1E9PZP8 Gm7417-201ENSMUST00000192950 473 ntBASIC13.24□□□□□ -0.29
Herc1E9PZP8 Gm7291-201ENSMUST00000199147 382 ntBASIC13.24□□□□□ -0.29
Herc1E9PZP8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Herc1E9PZP8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Herc1E9PZP8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Herc1E9PZP8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Herc1E9PZP8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Herc1E9PZP8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.23□□□□□ -0.29
Herc1E9PZP8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Herc1E9PZP8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Herc1E9PZP8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Herc1E9PZP8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.22□□□□□ -0.29
Herc1E9PZP8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Herc1E9PZP8 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.22□□□□□ -0.29
Herc1E9PZP8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Herc1E9PZP8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Herc1E9PZP8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Herc1E9PZP8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Herc1E9PZP8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Herc1E9PZP8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Herc1E9PZP8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Herc1E9PZP8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Herc1E9PZP8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Herc1E9PZP8 Gm27801-201ENSMUST00000184174 223 ntBASIC13.21□□□□□ -0.29
Herc1E9PZP8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.21□□□□□ -0.29
Herc1E9PZP8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Herc1E9PZP8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Herc1E9PZP8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Herc1E9PZP8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.21□□□□□ -0.3
Herc1E9PZP8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.21□□□□□ -0.3
Herc1E9PZP8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Herc1E9PZP8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.21□□□□□ -0.3
Herc1E9PZP8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Herc1E9PZP8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Herc1E9PZP8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Herc1E9PZP8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
Herc1E9PZP8 Spcs1-204ENSMUST00000226782 949 ntBASIC13.2□□□□□ -0.3
Herc1E9PZP8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Herc1E9PZP8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Herc1E9PZP8 Gm9905-201ENSMUST00000065740 1845 ntBASIC13.2□□□□□ -0.3
Herc1E9PZP8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Herc1E9PZP8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Herc1E9PZP8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Herc1E9PZP8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.19□□□□□ -0.3
Herc1E9PZP8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Herc1E9PZP8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Herc1E9PZP8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Herc1E9PZP8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.19□□□□□ -0.3
Herc1E9PZP8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Herc1E9PZP8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.19□□□□□ -0.3
Herc1E9PZP8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC13.19□□□□□ -0.3
Herc1E9PZP8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.18□□□□□ -0.3
Herc1E9PZP8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.18□□□□□ -0.3
Herc1E9PZP8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Herc1E9PZP8 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.18□□□□□ -0.3
Herc1E9PZP8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Herc1E9PZP8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Herc1E9PZP8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.18□□□□□ -0.3
Herc1E9PZP8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.17□□□□□ -0.3
Herc1E9PZP8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Herc1E9PZP8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.17□□□□□ -0.3
Herc1E9PZP8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms