Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh17E9PXF0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh17E9PXF0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh17E9PXF0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh17E9PXF0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh17E9PXF0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.67■□□□□ 0.9
Pcdh17E9PXF0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh17E9PXF0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh17E9PXF0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh17E9PXF0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh17E9PXF0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh17E9PXF0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh17E9PXF0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh17E9PXF0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh17E9PXF0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh17E9PXF0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdh17E9PXF0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh17E9PXF0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdh17E9PXF0 Gm5812-201ENSMUST00000061073 957 ntBASIC20.65■□□□□ 0.9
Pcdh17E9PXF0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh17E9PXF0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh17E9PXF0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh17E9PXF0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh17E9PXF0 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.64■□□□□ 0.89
Pcdh17E9PXF0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh17E9PXF0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Pcdh17E9PXF0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh17E9PXF0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh17E9PXF0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdh17E9PXF0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh17E9PXF0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh17E9PXF0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh17E9PXF0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh17E9PXF0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh17E9PXF0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdh17E9PXF0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.61■□□□□ 0.89
Pcdh17E9PXF0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh17E9PXF0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.61■□□□□ 0.89
Pcdh17E9PXF0 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.61■□□□□ 0.89
Pcdh17E9PXF0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh17E9PXF0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh17E9PXF0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
Pcdh17E9PXF0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdh17E9PXF0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh17E9PXF0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh17E9PXF0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdh17E9PXF0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh17E9PXF0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh17E9PXF0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.58■□□□□ 0.88
Pcdh17E9PXF0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh17E9PXF0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh17E9PXF0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh17E9PXF0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdh17E9PXF0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh17E9PXF0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdh17E9PXF0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdh17E9PXF0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh17E9PXF0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdh17E9PXF0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdh17E9PXF0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.56■□□□□ 0.88
Pcdh17E9PXF0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdh17E9PXF0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdh17E9PXF0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh17E9PXF0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdh17E9PXF0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh17E9PXF0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh17E9PXF0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh17E9PXF0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdh17E9PXF0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pcdh17E9PXF0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pcdh17E9PXF0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh17E9PXF0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh17E9PXF0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh17E9PXF0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdh17E9PXF0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh17E9PXF0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh17E9PXF0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh17E9PXF0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh17E9PXF0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh17E9PXF0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh17E9PXF0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh17E9PXF0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh17E9PXF0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh17E9PXF0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.53■□□□□ 0.88
Pcdh17E9PXF0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh17E9PXF0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh17E9PXF0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdh17E9PXF0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh17E9PXF0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh17E9PXF0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh17E9PXF0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh17E9PXF0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh17E9PXF0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Pcdh17E9PXF0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdh17E9PXF0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms