Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3543D3Z235 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3543D3Z235 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3543D3Z235 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3543D3Z235 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3543D3Z235 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3543D3Z235 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3543D3Z235 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3543D3Z235 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3543D3Z235 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.03■□□□□ 0.8
Gm3543D3Z235 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3543D3Z235 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3543D3Z235 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.02■□□□□ 0.8
Gm3543D3Z235 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3543D3Z235 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3543D3Z235 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.02■□□□□ 0.8
Gm3543D3Z235 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3543D3Z235 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3543D3Z235 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3543D3Z235 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3543D3Z235 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Gm3543D3Z235 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3543D3Z235 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm3543D3Z235 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3543D3Z235 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3543D3Z235 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.01■□□□□ 0.79
Gm3543D3Z235 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3543D3Z235 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3543D3Z235 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3543D3Z235 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm3543D3Z235 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gm3543D3Z235 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.99■□□□□ 0.79
Gm3543D3Z235 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3543D3Z235 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Gm3543D3Z235 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3543D3Z235 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3543D3Z235 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3543D3Z235 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3543D3Z235 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3543D3Z235 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3543D3Z235 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3543D3Z235 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.97■□□□□ 0.79
Gm3543D3Z235 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3543D3Z235 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3543D3Z235 Gm7332-201ENSMUST00000118351 454 ntBASIC19.97■□□□□ 0.79
Gm3543D3Z235 Gm27502-201ENSMUST00000183495 199 ntBASIC19.97■□□□□ 0.79
Gm3543D3Z235 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3543D3Z235 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.96■□□□□ 0.79
Gm3543D3Z235 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3543D3Z235 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3543D3Z235 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3543D3Z235 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3543D3Z235 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.96■□□□□ 0.79
Gm3543D3Z235 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Gm3543D3Z235 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3543D3Z235 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.95■□□□□ 0.78
Gm3543D3Z235 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3543D3Z235 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3543D3Z235 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Gm3543D3Z235 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3543D3Z235 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm3543D3Z235 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Gm3543D3Z235 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3543D3Z235 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3543D3Z235 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.94■□□□□ 0.78
Gm3543D3Z235 Gm14523-201ENSMUST00000117260 558 ntBASIC19.94■□□□□ 0.78
Gm3543D3Z235 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Gm3543D3Z235 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm3543D3Z235 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3543D3Z235 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.93■□□□□ 0.78
Gm3543D3Z235 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3543D3Z235 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3543D3Z235 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.93■□□□□ 0.78
Gm3543D3Z235 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm3543D3Z235 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3543D3Z235 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3543D3Z235 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3543D3Z235 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3543D3Z235 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm3543D3Z235 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.92■□□□□ 0.78
Gm3543D3Z235 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm3543D3Z235 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.91■□□□□ 0.78
Gm3543D3Z235 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Gm3543D3Z235 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.91■□□□□ 0.78
Gm3543D3Z235 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.91■□□□□ 0.78
Gm3543D3Z235 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Gm3543D3Z235 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Gm3543D3Z235 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3543D3Z235 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm3543D3Z235 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Gm3543D3Z235 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3543D3Z235 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.89■□□□□ 0.77
Gm3543D3Z235 Gm44428-201ENSMUST00000204474 874 ntBASIC19.89■□□□□ 0.77
Gm3543D3Z235 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3543D3Z235 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm3543D3Z235 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3543D3Z235 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3543D3Z235 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Gm3543D3Z235 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm3543D3Z235 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms