Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Sh2d4bA6X942 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Sh2d4bA6X942 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh2d4bA6X942 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sh2d4bA6X942 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sh2d4bA6X942 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh2d4bA6X942 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.74■■□□□ 1.39
Sh2d4bA6X942 Gm15820-201ENSMUST00000201566 728 ntBASIC23.74■■□□□ 1.39
Sh2d4bA6X942 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh2d4bA6X942 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Sh2d4bA6X942 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh2d4bA6X942 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.74■■□□□ 1.39
Sh2d4bA6X942 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh2d4bA6X942 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Sh2d4bA6X942 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Sh2d4bA6X942 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sh2d4bA6X942 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sh2d4bA6X942 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sh2d4bA6X942 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.72■■□□□ 1.39
Sh2d4bA6X942 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sh2d4bA6X942 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Sh2d4bA6X942 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sh2d4bA6X942 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.71■■□□□ 1.39
Sh2d4bA6X942 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sh2d4bA6X942 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sh2d4bA6X942 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sh2d4bA6X942 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Sh2d4bA6X942 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sh2d4bA6X942 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.68■■□□□ 1.38
Sh2d4bA6X942 Gm43566-201ENSMUST00000196851 808 ntBASIC23.68■■□□□ 1.38
Sh2d4bA6X942 Gm44428-201ENSMUST00000204474 874 ntBASIC23.68■■□□□ 1.38
Sh2d4bA6X942 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Sh2d4bA6X942 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Sh2d4bA6X942 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.68■■□□□ 1.38
Sh2d4bA6X942 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sh2d4bA6X942 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh2d4bA6X942 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh2d4bA6X942 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Sh2d4bA6X942 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh2d4bA6X942 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.67■■□□□ 1.38
Sh2d4bA6X942 Gm45102-201ENSMUST00000207427 857 ntBASIC23.66■■□□□ 1.38
Sh2d4bA6X942 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sh2d4bA6X942 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh2d4bA6X942 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh2d4bA6X942 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sh2d4bA6X942 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.65■■□□□ 1.38
Sh2d4bA6X942 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
Sh2d4bA6X942 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh2d4bA6X942 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sh2d4bA6X942 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sh2d4bA6X942 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sh2d4bA6X942 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
Sh2d4bA6X942 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sh2d4bA6X942 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Sh2d4bA6X942 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.64■■□□□ 1.37
Sh2d4bA6X942 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Sh2d4bA6X942 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.64■■□□□ 1.37
Sh2d4bA6X942 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.63■■□□□ 1.37
Sh2d4bA6X942 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Sh2d4bA6X942 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sh2d4bA6X942 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Sh2d4bA6X942 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sh2d4bA6X942 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.62■■□□□ 1.37
Sh2d4bA6X942 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.62■■□□□ 1.37
Sh2d4bA6X942 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sh2d4bA6X942 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.62■■□□□ 1.37
Sh2d4bA6X942 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sh2d4bA6X942 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sh2d4bA6X942 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sh2d4bA6X942 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.62■■□□□ 1.37
Sh2d4bA6X942 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sh2d4bA6X942 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sh2d4bA6X942 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Sh2d4bA6X942 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.61■■□□□ 1.37
Sh2d4bA6X942 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sh2d4bA6X942 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.61■■□□□ 1.37
Sh2d4bA6X942 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh2d4bA6X942 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh2d4bA6X942 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Sh2d4bA6X942 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh2d4bA6X942 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sh2d4bA6X942 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sh2d4bA6X942 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sh2d4bA6X942 Gm13238-201ENSMUST00000117655 780 ntBASIC23.59■■□□□ 1.37
Sh2d4bA6X942 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Sh2d4bA6X942 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sh2d4bA6X942 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sh2d4bA6X942 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sh2d4bA6X942 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sh2d4bA6X942 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Sh2d4bA6X942 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Sh2d4bA6X942 Gm45444-201ENSMUST00000211394 898 ntBASIC23.58■■□□□ 1.37
Sh2d4bA6X942 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Sh2d4bA6X942 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.57■■□□□ 1.36
Sh2d4bA6X942 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sh2d4bA6X942 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Sh2d4bA6X942 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Sh2d4bA6X942 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
Sh2d4bA6X942 Gm14117-201ENSMUST00000122417 843 ntBASIC23.56■■□□□ 1.36
Sh2d4bA6X942 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms