Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a4A2AX52 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a4A2AX52 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a4A2AX52 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a4A2AX52 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col6a4A2AX52 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a4A2AX52 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a4A2AX52 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.93■□□□□ 0.62
Col6a4A2AX52 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a4A2AX52 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col6a4A2AX52 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a4A2AX52 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a4A2AX52 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col6a4A2AX52 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Col6a4A2AX52 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Col6a4A2AX52 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col6a4A2AX52 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.91■□□□□ 0.62
Col6a4A2AX52 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col6a4A2AX52 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.91■□□□□ 0.62
Col6a4A2AX52 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.91■□□□□ 0.62
Col6a4A2AX52 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Col6a4A2AX52 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a4A2AX52 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a4A2AX52 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a4A2AX52 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a4A2AX52 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.9■□□□□ 0.62
Col6a4A2AX52 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.9■□□□□ 0.62
Col6a4A2AX52 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Col6a4A2AX52 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col6a4A2AX52 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.9■□□□□ 0.62
Col6a4A2AX52 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col6a4A2AX52 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a4A2AX52 Serp2-204ENSMUST00000228055 705 ntBASIC18.89■□□□□ 0.61
Col6a4A2AX52 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Col6a4A2AX52 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col6a4A2AX52 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col6a4A2AX52 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.89■□□□□ 0.61
Col6a4A2AX52 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Col6a4A2AX52 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.88■□□□□ 0.61
Col6a4A2AX52 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a4A2AX52 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a4A2AX52 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a4A2AX52 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col6a4A2AX52 Etf1-202ENSMUST00000180351 108 ntBASIC18.88■□□□□ 0.61
Col6a4A2AX52 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.88■□□□□ 0.61
Col6a4A2AX52 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a4A2AX52 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.87■□□□□ 0.61
Col6a4A2AX52 Gm21956-201ENSMUST00000179946 522 ntBASIC18.87■□□□□ 0.61
Col6a4A2AX52 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Col6a4A2AX52 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.87■□□□□ 0.61
Col6a4A2AX52 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a4A2AX52 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col6a4A2AX52 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a4A2AX52 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.86■□□□□ 0.61
Col6a4A2AX52 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a4A2AX52 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a4A2AX52 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Col6a4A2AX52 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a4A2AX52 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a4A2AX52 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a4A2AX52 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a4A2AX52 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.85■□□□□ 0.61
Col6a4A2AX52 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a4A2AX52 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.85■□□□□ 0.61
Col6a4A2AX52 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col6a4A2AX52 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a4A2AX52 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a4A2AX52 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a4A2AX52 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.84■□□□□ 0.61
Col6a4A2AX52 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col6a4A2AX52 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.83■□□□□ 0.61
Col6a4A2AX52 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col6a4A2AX52 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a4A2AX52 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a4A2AX52 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a4A2AX52 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a4A2AX52 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.82■□□□□ 0.6
Col6a4A2AX52 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.82■□□□□ 0.6
Col6a4A2AX52 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Col6a4A2AX52 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Col6a4A2AX52 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a4A2AX52 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a4A2AX52 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.81■□□□□ 0.6
Col6a4A2AX52 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a4A2AX52 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a4A2AX52 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.81■□□□□ 0.6
Col6a4A2AX52 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.81■□□□□ 0.6
Col6a4A2AX52 Gm13241-201ENSMUST00000094493 780 ntBASIC18.81■□□□□ 0.6
Col6a4A2AX52 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a4A2AX52 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a4A2AX52 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Col6a4A2AX52 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a4A2AX52 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.8■□□□□ 0.6
Col6a4A2AX52 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col6a4A2AX52 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a4A2AX52 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a4A2AX52 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a4A2AX52 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a4A2AX52 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a4A2AX52 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms