Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Trav21-dv12A0A075B6C4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav21-dv12A0A075B6C4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav21-dv12A0A075B6C4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav21-dv12A0A075B6C4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav21-dv12A0A075B6C4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav21-dv12A0A075B6C4 Gm11599-201ENSMUST00000118720 878 ntBASIC17.04■□□□□ 0.32
Trav21-dv12A0A075B6C4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav21-dv12A0A075B6C4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav21-dv12A0A075B6C4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav21-dv12A0A075B6C4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav21-dv12A0A075B6C4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav21-dv12A0A075B6C4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav21-dv12A0A075B6C4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav21-dv12A0A075B6C4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Trav21-dv12A0A075B6C4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav21-dv12A0A075B6C4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav21-dv12A0A075B6C4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav21-dv12A0A075B6C4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav21-dv12A0A075B6C4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Trav21-dv12A0A075B6C4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav21-dv12A0A075B6C4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.02■□□□□ 0.31
Trav21-dv12A0A075B6C4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav21-dv12A0A075B6C4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav21-dv12A0A075B6C4 Mir3960-201ENSMUST00000198213 73 ntBASIC17.01■□□□□ 0.31
Trav21-dv12A0A075B6C4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav21-dv12A0A075B6C4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav21-dv12A0A075B6C4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav21-dv12A0A075B6C4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav21-dv12A0A075B6C4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trav21-dv12A0A075B6C4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav21-dv12A0A075B6C4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav21-dv12A0A075B6C4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav21-dv12A0A075B6C4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav21-dv12A0A075B6C4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav21-dv12A0A075B6C4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav21-dv12A0A075B6C4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.99■□□□□ 0.31
Trav21-dv12A0A075B6C4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
Trav21-dv12A0A075B6C4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trav21-dv12A0A075B6C4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav21-dv12A0A075B6C4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav21-dv12A0A075B6C4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav21-dv12A0A075B6C4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav21-dv12A0A075B6C4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav21-dv12A0A075B6C4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav21-dv12A0A075B6C4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav21-dv12A0A075B6C4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav21-dv12A0A075B6C4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav21-dv12A0A075B6C4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav21-dv12A0A075B6C4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Trav21-dv12A0A075B6C4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav21-dv12A0A075B6C4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav21-dv12A0A075B6C4 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.96■□□□□ 0.31
Trav21-dv12A0A075B6C4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav21-dv12A0A075B6C4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav21-dv12A0A075B6C4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
Trav21-dv12A0A075B6C4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav21-dv12A0A075B6C4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav21-dv12A0A075B6C4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav21-dv12A0A075B6C4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav21-dv12A0A075B6C4 Gm9812-201ENSMUST00000061934 968 ntBASIC16.95■□□□□ 0.3
Trav21-dv12A0A075B6C4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav21-dv12A0A075B6C4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav21-dv12A0A075B6C4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav21-dv12A0A075B6C4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav21-dv12A0A075B6C4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav21-dv12A0A075B6C4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav21-dv12A0A075B6C4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav21-dv12A0A075B6C4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav21-dv12A0A075B6C4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.94■□□□□ 0.3
Trav21-dv12A0A075B6C4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav21-dv12A0A075B6C4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav21-dv12A0A075B6C4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav21-dv12A0A075B6C4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav21-dv12A0A075B6C4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav21-dv12A0A075B6C4 Gm45364-201ENSMUST00000210883 159 ntBASIC16.93■□□□□ 0.3
Trav21-dv12A0A075B6C4 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.93■□□□□ 0.3
Trav21-dv12A0A075B6C4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav21-dv12A0A075B6C4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Trav21-dv12A0A075B6C4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav21-dv12A0A075B6C4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav21-dv12A0A075B6C4 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.93■□□□□ 0.3
Trav21-dv12A0A075B6C4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav21-dv12A0A075B6C4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav21-dv12A0A075B6C4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav21-dv12A0A075B6C4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav21-dv12A0A075B6C4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav21-dv12A0A075B6C4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.92■□□□□ 0.3
Trav21-dv12A0A075B6C4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav21-dv12A0A075B6C4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav21-dv12A0A075B6C4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav21-dv12A0A075B6C4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav21-dv12A0A075B6C4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav21-dv12A0A075B6C4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms