Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-7A0A075B6B0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-7A0A075B6B0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-7A0A075B6B0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-7A0A075B6B0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav6d-7A0A075B6B0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-7A0A075B6B0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6d-7A0A075B6B0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav6d-7A0A075B6B0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-7A0A075B6B0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-7A0A075B6B0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav6d-7A0A075B6B0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6d-7A0A075B6B0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6d-7A0A075B6B0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6d-7A0A075B6B0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6d-7A0A075B6B0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6d-7A0A075B6B0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6d-7A0A075B6B0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6d-7A0A075B6B0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trav6d-7A0A075B6B0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6d-7A0A075B6B0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6d-7A0A075B6B0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav6d-7A0A075B6B0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav6d-7A0A075B6B0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-7A0A075B6B0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-7A0A075B6B0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-7A0A075B6B0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-7A0A075B6B0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6d-7A0A075B6B0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trav6d-7A0A075B6B0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6d-7A0A075B6B0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav6d-7A0A075B6B0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6d-7A0A075B6B0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav6d-7A0A075B6B0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6d-7A0A075B6B0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-7A0A075B6B0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav6d-7A0A075B6B0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-7A0A075B6B0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.05■□□□□ 0.32
Trav6d-7A0A075B6B0 Gm4799-201ENSMUST00000095396 657 ntBASIC17.05■□□□□ 0.32
Trav6d-7A0A075B6B0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-7A0A075B6B0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6d-7A0A075B6B0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav6d-7A0A075B6B0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.04■□□□□ 0.32
Trav6d-7A0A075B6B0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6d-7A0A075B6B0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav6d-7A0A075B6B0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6d-7A0A075B6B0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6d-7A0A075B6B0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.04■□□□□ 0.32
Trav6d-7A0A075B6B0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav6d-7A0A075B6B0 Mir6538-201ENSMUST00000183713 110 ntBASIC17.04■□□□□ 0.32
Trav6d-7A0A075B6B0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6d-7A0A075B6B0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6d-7A0A075B6B0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Trav6d-7A0A075B6B0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6d-7A0A075B6B0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6d-7A0A075B6B0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6d-7A0A075B6B0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6d-7A0A075B6B0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6d-7A0A075B6B0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6d-7A0A075B6B0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6d-7A0A075B6B0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6d-7A0A075B6B0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6d-7A0A075B6B0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6d-7A0A075B6B0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6d-7A0A075B6B0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6d-7A0A075B6B0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6d-7A0A075B6B0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6d-7A0A075B6B0 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.01■□□□□ 0.31
Trav6d-7A0A075B6B0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6d-7A0A075B6B0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6d-7A0A075B6B0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6d-7A0A075B6B0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-7A0A075B6B0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-7A0A075B6B0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-7A0A075B6B0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-7A0A075B6B0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-7A0A075B6B0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-7A0A075B6B0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6d-7A0A075B6B0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav6d-7A0A075B6B0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-7A0A075B6B0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-7A0A075B6B0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-7A0A075B6B0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-7A0A075B6B0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav6d-7A0A075B6B0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-7A0A075B6B0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6d-7A0A075B6B0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms